RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FAM90A27PA6NNH2 459 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 H7C1D1 291 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 KCNK3O14649 394 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 SLC27A2O14975 620 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 KATNA1O75449 491 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 PRKD3O94806 890 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 ZBTB7AO95365 584 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 C4BPAP04003 597 aaKnown RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 SDHAP31040 664 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 GJA4P35212 333 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 YBX1P67809 324 aaKnown RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 SMAD3P84022 425 aaKnown RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 TMPRSS15P98073 1019 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 TUSC3Q13454 348 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 SLC9A5Q14940 896 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 SMAD2Q15796 467 aaKnown RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 GPR158Q5T848 1215 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 SIRT2Q8IXJ6 389 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 KIAA1958Q8N8K9 716 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 COG1Q8WTW3 980 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 INTS4Q96HW7 963 aaKnown RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 ELF4Q99607 663 aaPredicted RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 AP5M1Q9H0R1 490 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 KCNH7Q9NS40 1196 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 HSPBP1Q9NZL4 362 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 KLHL14Q9P2G3 628 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 KLHL42Q9P2K6 505 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 NUDT5Q9UKK9 219 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 PCDHB4Q9Y5E5 795 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 ATP23Q9Y6H3 246 aa5.63□□□□□ -1.51
PTCH1-216ENST00000548379 EIF4G1Q04637 1599 aaKnown RBP5.63□□□□□ -1.51
PTCH1-216ENST00000548379 ZC3H12DA2A288 527 aaKnown RBP5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ACOT7O00154 380 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ULK1O75385 1050 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 LTFP02788 710 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 MPOP05164 745 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 PTPN1P18031 435 aaKnown RBP5.62□□□□□ -1.51
PTCH1-216ENST00000548379 MAPKAPK2P49137 400 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ERVK-21P61565 698 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 TERF2Q15554 542 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 INAVAQ3KP66 663 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 CPZQ66K79 652 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 RPTNQ6XPR3 784 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.62□□□□□ -1.51
PTCH1-216ENST00000548379 C11orf74Q86VG3 221 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 MIB1Q86YT6 1006 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 IRF2BP1Q8IU81 584 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 TRIM48Q8IWZ4 208 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 RBM12BQ8IXT5 1001 aaKnown RBP5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ARRDC4Q8NCT1 418 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 SLC5A5Q92911 643 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 C16orf92Q96LL3 132 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 MENTQ9BUN1 341 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 SLC6A17Q9H1V8 727 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 RXFP1Q9HBX9 757 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ZFP64Q9NPA5 681 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ACSS2Q9NR19 701 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 THRAP3Q9Y2W1 955 aaKnown RBP5.62□□□□□ -1.51
PTCH1-216ENST00000548379 SCRIBQ14160 1630 aa5.62□□□□□ -1.51
PTCH1-216ENST00000548379 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.61□□□□□ -1.51
PTCH1-216ENST00000548379 F8W031 263 aaPredicted RBP5.61□□□□□ -1.51
PTCH1-216ENST00000548379 HRKO00198 91 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 SCDO00767 359 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 BUB1BO60566 1050 aaPredicted RBP5.61□□□□□ -1.51
PTCH1-216ENST00000548379 KRT37O76014 449 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 CYP17A1P05093 508 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 ITGB5P18084 799 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 SLC9A1P19634 815 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 SDHBP21912 280 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 FNTBP49356 437 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 KIF11P52732 1056 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 SESN3P58005 492 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 FAPQ12884 760 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 LRRC32Q14392 662 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 ZNF174Q15697 407 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 PLEKHN1Q494U1 663 aaPredicted RBP5.61□□□□□ -1.51
PTCH1-216ENST00000548379 CATSPEREQ5SY80 951 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 ESRP1Q6NXG1 681 aaKnown RBP5.61□□□□□ -1.51
PTCH1-216ENST00000548379 MILR1Q7Z6M3 343 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 CBARPQ8N350 705 aaPredicted RBP5.61□□□□□ -1.51
PTCH1-216ENST00000548379 CNTD1Q8N815 330 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 CLRN3Q8NCR9 226 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 ZMAT4Q9H898 229 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 VTA1Q9NP79 307 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 HCFC2Q9Y5Z7 792 aa5.61□□□□□ -1.51
PTCH1-216ENST00000548379 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 NUDT19A8MXV4 375 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.6□□□□□ -1.51
PTCH1-216ENST00000548379 GABRDO14764 452 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 HIP1RO75146 1068 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 PAPLNO95428 1278 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 S100BP04271 92 aaPredicted RBP5.6□□□□□ -1.51
PTCH1-216ENST00000548379 GLI1P08151 1106 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 FBLN1P23142 703 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 HERVK_113P62684 666 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 PRR5P85299 388 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 RAB3GAP1Q15042 981 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 DDB1Q16531 1140 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 ADGRF1Q5T601 910 aa5.6□□□□□ -1.51
PTCH1-216ENST00000548379 SYDE2Q5VT97 1194 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms