RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TRIM43BA6NCK2 446 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 RGS20O76081 388 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 TOB1P50616 345 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 PCSK9Q8NBP7 692 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 TRIM43Q96BQ3 446 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 RRP36Q96EU6 259 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 KCNH3Q9ULD8 1083 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 GRIN2DO15399 1336 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 CNTNAP5Q8WYK1 1306 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 TPM2P07951 284 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 ITGB8P26012 769 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 CDK7P50613 346 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 CCDC82Q8N4S0 544 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 SCFD2Q8WU76 684 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 IWS1Q96ST2 819 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 PDCD2LQ9BRP1 358 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 SPC25Q9HBM1 224 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 STARD7Q9NQZ5 370 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 SPTLC3Q9NUV7 552 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 MAP3K20Q9NYL2 800 aaKnown RBP19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 KCNJ14Q9UNX9 436 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 SZT2Q5T011 3432 aa19.45■□□□□ 0.7
RBFOX1-207ENST00000547338 NR3C2P08235 984 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 BMP8BP34820 402 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 FXR1P51114 621 aaKnown RBP eCLIP19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 PFKFB3Q16875 520 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 ARHGEF16Q5VV41 709 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 CXCL17Q6UXB2 119 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 KRBA2Q6ZNG9 492 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 C11orf57Q6ZUT1 292 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 ANKRD33Q7Z3H0 272 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 DHX40Q8IX18 779 aaKnown RBP19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 SAMD3Q8N6K7 520 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 AP5M1Q9H0R1 490 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 FBXO2Q9UK22 296 aaPredicted RBP19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 FRMPD4Q14CM0 1322 aa19.44■□□□□ 0.7
RBFOX1-207ENST00000547338 GCOM1H8Y6P7 765 aaPredicted RBP19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 MEIS2O14770 477 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 POLR2MP0CAP2 368 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 SCG2P13521 617 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 PGM5Q15124 567 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 TRIML1Q8N9V2 468 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 SLC43A3Q8NBI5 491 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 CNNM3Q8NE01 707 aa19.43■□□□□ 0.7
RBFOX1-207ENST00000547338 PQBP1O60828 265 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 TXNP10599 105 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 MDM2Q00987 491 aaPredicted RBP19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 FAAP100Q0VG06 881 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 TRAF1Q13077 416 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 NOLC1Q14978 699 aaKnown RBP eCLIP19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 STXBP2Q15833 593 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 SEPT14Q6ZU15 432 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 GLT1D1Q96MS3 346 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 MPHOSPH6Q99547 160 aaKnown RBP19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 IMPACTQ9P2X3 320 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 DACH1Q9UI36 760 aa19.42■□□□□ 0.7
RBFOX1-207ENST00000547338 SCN10AQ9Y5Y9 1956 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 B4DLN1 442 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 MRPL12P52815 198 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 LY6KQ17RY6 165 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 TYW1BQ6NUM6 668 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 USP17L6PQ6QN14 398 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 VSIG10LQ86VR7 867 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 FCHSD1Q86WN1 690 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 KIAA1524Q8TCG1 905 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 ZFP91Q96JP5 570 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 TOX2Q96NM4 488 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 LAMA2P24043 3122 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 A0A0U1RQG5 324 aaPredicted RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 A6NJR5 290 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 EIF3JO75822 258 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 CLTBP09497 229 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 PSMC6P62333 389 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 ARHGAP1Q07960 439 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 NT5DC1Q5TFE4 455 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 OR6J1Q8NGC5 347 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 GPKOWQ92917 476 aaPredicted RBP eCLIP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 TNFRSF25Q93038 417 aa19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 SEC63Q9UGP8 760 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 DDX41Q9UJV9 622 aaKnown RBP19.41■□□□□ 0.7
RBFOX1-207ENST00000547338 ARVCFO00192 962 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 PIK3CDO00329 1044 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 KIAA0355O15063 1070 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 NKRFO15226 690 aaKnown RBP eCLIP19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 GSDMDP57764 484 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 MRPS9P82933 396 aaKnown RBP19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 PURAQ00577 322 aaKnown RBP19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 NR5A1Q13285 461 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 TTLL4Q14679 1199 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 WWC2Q6AWC2 1192 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 FAM126BQ8IXS8 530 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 CCDC148Q8NFR7 591 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 PRDM5Q9NQX1 630 aaPredicted RBP19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 VPS54Q9P1Q0 977 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 TBX21Q9UL17 535 aa19.4■□□□□ 0.7
RBFOX1-207ENST00000547338 A0A1W2PPC1 479 aa19.39■□□□□ 0.69
RBFOX1-207ENST00000547338 MYCLP12524 364 aaPredicted RBP19.39■□□□□ 0.69
RBFOX1-207ENST00000547338 DAGLBQ8NCG7 672 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms