RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 HOXD8P13378 290 aaPredicted RBP26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 TXKP42681 527 aa26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 CIZ1Q9ULV3 898 aaPredicted RBP26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 MYL3P08590 195 aa26.14■■□□□ 1.78
SMARCD1-203ENST00000547247 SF3A1Q15459 793 aaKnown RBP26.14■■□□□ 1.78
SMARCD1-203ENST00000547247 SMAP1Q8IYB5 467 aaPredicted RBP26.14■■□□□ 1.78
SMARCD1-203ENST00000547247 ZNF396Q96N95 335 aaPredicted RBP26.14■■□□□ 1.78
SMARCD1-203ENST00000547247 UNC45AQ9H3U1 944 aa26.14■■□□□ 1.78
SMARCD1-203ENST00000547247 TTC12Q9H892 705 aaPredicted RBP26.14■■□□□ 1.78
SMARCD1-203ENST00000547247 GSTTP1A0A1W2PQM5 241 aa26.13■■□□□ 1.77
SMARCD1-203ENST00000547247 TCF7P36402 384 aaPredicted RBP26.13■■□□□ 1.77
SMARCD1-203ENST00000547247 MNX1P50219 401 aaPredicted RBP26.13■■□□□ 1.77
SMARCD1-203ENST00000547247 ACLYP53396 1101 aa26.13■■□□□ 1.77
SMARCD1-203ENST00000547247 VAV3Q9UKW4 847 aa26.13■■□□□ 1.77
SMARCD1-203ENST00000547247 PHF24Q9UPV7 400 aa26.13■■□□□ 1.77
SMARCD1-203ENST00000547247 WDR64B1ANS9 1081 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 CHMP2AO43633 222 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 ATG7O95352 703 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 SFNP31947 248 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 ATP2C1P98194 919 aaPredicted RBP26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 PURAQ00577 322 aaKnown RBP26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 PPP2R5CQ13362 524 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 FOXD4L6Q3SYB3 417 aaPredicted RBP26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 B3GNT9Q6UX72 402 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 CXCL17Q6UXB2 119 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 FOXD4L3Q6VB84 417 aaPredicted RBP26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 USP28Q96RU2 1077 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 SAMM50Q9Y512 469 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 ATP6V1DQ9Y5K8 247 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 CLIC4Q9Y696 253 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 PRPHP41219 470 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 MIS18BP1Q6P0N0 1132 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 ABHD15Q6UXT9 468 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 FTOQ9C0B1 505 aaKnown RBP eCLIP26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 DISC1Q9NRI5 854 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 PCDHA10Q9Y5I2 948 aa26.12■■□□□ 1.77
SMARCD1-203ENST00000547247 CABYRO75952 493 aa26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 JAK3P52333 1124 aa26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 CEBPZQ03701 1054 aaKnown RBP26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 UTP14CQ5TAP6 766 aaKnown RBP26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 ATL3Q6DD88 541 aa26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 MIER3Q7Z3K6 550 aa26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 RDM1Q8NG50 284 aa26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 GLT1D1Q96MS3 346 aa26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 MTG1Q9BT17 334 aaPredicted RBP26.11■■□□□ 1.77
SMARCD1-203ENST00000547247 LGALS2P05162 132 aa26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 SPIRE1Q08AE8 756 aa26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 TMEM266Q2M3C6 531 aa26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 ARL6IP4Q66PJ3 421 aaKnown RBP26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 DIS3LQ8TF46 1054 aaKnown RBP26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 FERMT2Q96AC1 680 aa26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 PAWRQ96IZ0 340 aaKnown RBP26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 TFIP11Q9UBB9 837 aaKnown RBP26.1■■□□□ 1.77
SMARCD1-203ENST00000547247 A0A1W2PQ45 241 aaPredicted RBP26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 A0A1W2PQY0 241 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 PSAPP07602 524 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 SUPT20HL2P0C7V6 817 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 ZNF286BP0CG31 522 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 TECP42680 631 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 NECAB2Q7Z6G3 386 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 VTI1AQ96AJ9 217 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 C16orf70Q9BSU1 422 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 AZI2Q9H6S1 392 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 MYH15Q9Y2K3 1946 aa26.09■■□□□ 1.77
SMARCD1-203ENST00000547247 IGKV6D-21A0A0A0MT36 114 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 LGR5O75473 907 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 COL6A1P12109 1028 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 MLLT1Q03111 559 aaPredicted RBP26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 PTPAQ15257 358 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 NCAPH2Q6IBW4 605 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 DTHD1Q6ZMT9 781 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 GLG1Q92896 1179 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 SENP6Q9GZR1 1112 aaPredicted RBP26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 SMARCAD1Q9H4L7 1026 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 CHMP5Q9NZZ3 219 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 EMSYQ7Z589 1322 aa26.08■■□□□ 1.77
SMARCD1-203ENST00000547247 EML1O00423 815 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 BACH1O14867 736 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 F2P00734 622 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 NASPP49321 788 aaPredicted RBP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 FXR2P51116 673 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 DNM1Q05193 864 aaKnown RBP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 TRIM50Q86XT4 487 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 PCYT2Q99447 389 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 KATNAL1Q9BW62 490 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 C11orf49Q9H6J7 331 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 STARD7Q9NQZ5 370 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 CFAP45Q9UL16 551 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 ZNF215Q9UL58 517 aaPredicted RBP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 TNRC18O15417 2968 aaPredicted RBP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 H3BRB1 525 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 STAT5BP51692 787 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 SLC39A14Q15043 492 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 FAM160B1Q5W0V3 765 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 SWSAP1Q6NVH7 229 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 CCDC60Q8IWA6 550 aaPredicted RBP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 KAT2BQ92831 832 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 RAB34Q9BZG1 259 aa26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 TUT1Q9H6E5 874 aaKnown RBP26.07■■□□□ 1.76
SMARCD1-203ENST00000547247 ZNF302Q9NR11 478 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms