RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 RGL1Q9NZL6 768 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 PNMA2Q9UL42 364 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 GJA3Q9Y6H8 435 aa20.65■□□□□ 0.9
VDR-204ENST00000547065 NKRFO15226 690 aaKnown RBP eCLIP20.64■□□□□ 0.9
VDR-204ENST00000547065 SLITRK3O94933 977 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 GHRHRQ02643 423 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 EDRF1Q3B7T1 1238 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 CCDC40Q4G0X9 1142 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 TBC1D10BQ4KMP7 808 aaPredicted RBP20.64■□□□□ 0.9
VDR-204ENST00000547065 DCAF15Q66K64 600 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 NELFCDQ8IXH7 590 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 ZC3H3Q8IXZ2 948 aaKnown RBP20.64■□□□□ 0.9
VDR-204ENST00000547065 CCDC170Q8IYT3 715 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 HOOK2Q96ED9 719 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 REEP2Q9BRK0 252 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 MXRA8Q9BRK3 442 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 ZNF577Q9BSK1 485 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 BHMT2Q9H2M3 363 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 MAP3K20Q9NYL2 800 aaKnown RBP20.64■□□□□ 0.9
VDR-204ENST00000547065 CGNQ9P2M7 1197 aaKnown RBP20.64■□□□□ 0.9
VDR-204ENST00000547065 MYO1AQ9UBC5 1043 aa20.64■□□□□ 0.9
VDR-204ENST00000547065 USP14P54578 494 aa20.64■□□□□ 0.89
VDR-204ENST00000547065 MARSP56192 900 aaKnown RBP20.64■□□□□ 0.89
VDR-204ENST00000547065 UBXN2AP68543 259 aa20.64■□□□□ 0.89
VDR-204ENST00000547065 CLEC4DQ8WXI8 215 aa20.64■□□□□ 0.89
VDR-204ENST00000547065 DYDC2Q96IM9 177 aa20.64■□□□□ 0.89
VDR-204ENST00000547065 EDEM3Q9BZQ6 932 aa20.64■□□□□ 0.89
VDR-204ENST00000547065 SLC38A10Q9HBR0 1119 aa20.64■□□□□ 0.89
VDR-204ENST00000547065 GAP43P17677 238 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 CYLC1P35663 651 aaPredicted RBP20.63■□□□□ 0.89
VDR-204ENST00000547065 KRT83P78385 493 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 EPHA7Q15375 998 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 EPM2AIP1Q7L775 607 aaPredicted RBP20.63■□□□□ 0.89
VDR-204ENST00000547065 NIPA1Q7RTP0 329 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 MNS1Q8NEH6 495 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 RIT2Q99578 217 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 RPTORQ8N122 1335 aa20.63■□□□□ 0.89
VDR-204ENST00000547065 SMCHD1A6NHR9 2005 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 A0A0U1RQJ8 604 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 ARP10275 920 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 BCRP11274 1271 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 HNRNPH3P31942 346 aaKnown RBP20.62■□□□□ 0.89
VDR-204ENST00000547065 ARHGAP25P42331 645 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 RASSF7Q02833 373 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 TUBB2AQ13885 445 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 CTTNQ14247 550 aaKnown RBP20.62■□□□□ 0.89
VDR-204ENST00000547065 ARHGAP27Q6ZUM4 889 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 SFR1Q86XK3 245 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 ATRIPQ8WXE1 791 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 TUBB2BQ9BVA1 445 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 TEKT3Q9BXF9 490 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 IRX2Q9BZI1 471 aaPredicted RBP20.62■□□□□ 0.89
VDR-204ENST00000547065 MMRN2Q9H8L6 949 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 CETN3O15182 167 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 TBCAO75347 108 aaKnown RBP20.62■□□□□ 0.89
VDR-204ENST00000547065 FDX1P10109 184 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 ADAM9Q13443 819 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 ZNF569Q5MCW4 686 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 NBPF12Q5TAG4 269 aaPredicted RBP20.62■□□□□ 0.89
VDR-204ENST00000547065 RINT1Q6NUQ1 792 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 ZNF662Q6ZS27 426 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 NACC1Q96RE7 527 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 RUSC1Q9BVN2 902 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 TANGO6Q9C0B7 1094 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.62■□□□□ 0.89
VDR-204ENST00000547065 PPP1R9AQ9ULJ8 1098 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 TRAF3IP3Q9Y228 551 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 MRFAP1Q9Y605 127 aa20.62■□□□□ 0.89
VDR-204ENST00000547065 V9GYY5 206 aaPredicted RBP20.62■□□□□ 0.89
VDR-204ENST00000547065 BRCA1P38398 1863 aaKnown RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 ASTN2O75129 1339 aaPredicted RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 IPO5O00410 1097 aaKnown RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 CHMP2AO43633 222 aa20.61■□□□□ 0.89
VDR-204ENST00000547065 ZBED4O75132 1171 aa20.61■□□□□ 0.89
VDR-204ENST00000547065 KNOP1Q1ED39 458 aaKnown RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 B3GNT9Q6UX72 402 aa20.61■□□□□ 0.89
VDR-204ENST00000547065 UNC45AQ9H3U1 944 aa20.61■□□□□ 0.89
VDR-204ENST00000547065 NHEJ1Q9H9Q4 299 aaPredicted RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 ZNF112Q9UJU3 913 aa20.61■□□□□ 0.89
VDR-204ENST00000547065 FAM184BQ9ULE4 1060 aa20.61■□□□□ 0.89
VDR-204ENST00000547065 REXO2Q9Y3B8 237 aaKnown RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 CTDP1Q9Y5B0 961 aaPredicted RBP20.61■□□□□ 0.89
VDR-204ENST00000547065 EIF3CLB5ME19 914 aaKnown RBP20.6■□□□□ 0.89
VDR-204ENST00000547065 NFIBO00712 420 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 PDXKO00764 312 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 CALUO43852 315 aaPredicted RBP20.6■□□□□ 0.89
VDR-204ENST00000547065 FLOT1O75955 427 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 ALAS1P13196 640 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 BMT2Q1RMZ1 405 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 TRIM59Q8IWR1 403 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 CPXCR1Q8N123 301 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 NEK11Q8NG66 645 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 PIGOQ8TEQ8 1089 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 EIF3CQ99613 913 aaKnown RBP20.6■□□□□ 0.89
VDR-204ENST00000547065 CARD6Q9BX69 1037 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 HAUS4Q9H6D7 363 aa20.6■□□□□ 0.89
VDR-204ENST00000547065 RAVER2Q9HCJ3 691 aaKnown RBP20.6■□□□□ 0.89
VDR-204ENST00000547065 PLAGL2Q9UPG8 496 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms