RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 LAMC2Q13753 1193 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 LY6KQ17RY6 165 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 DUSP28Q4G0W2 176 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 CELF3Q5SZQ8 465 aaKnown RBP17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 HYIQ5T013 277 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 RRAGBQ5VZM2 374 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 KANK3Q6NY19 840 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 USP49Q70CQ1 688 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 CYFIP1Q7L576 1253 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 DHX37Q8IY37 1157 aaKnown RBP17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 FMR1NBQ8N0W7 255 aaPredicted RBP17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 TIGD1Q96MW7 591 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 CUEDC2Q9H467 287 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 TUFT1Q9NNX1 390 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 DISC1Q9NRI5 854 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 DACT1Q9NYF0 836 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 HOOK1Q9UJC3 728 aaKnown RBP17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
TRAFD1-203ENST00000547063 PP2D1A8MPX8 630 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 POLR2DO15514 142 aaKnown RBP17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 ADCY3O60266 1144 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 FARP2O94887 1054 aaPredicted RBP17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 HMGCRP04035 888 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 P4HBP07237 508 aaKnown RBP17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 PSAPP07602 524 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 CDC25AP30304 524 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 STAT6P42226 847 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 TNFAIP2Q03169 654 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 CCDC144BQ3MJ40 725 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 MIS18BP1Q6P0N0 1132 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 CEP57L1Q8IYX8 460 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 SLAIN1Q8ND83 568 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 TRIB2Q92519 343 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 EIF2AK1Q9BQI3 630 aaKnown RBP17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 MMTAG2Q9BU76 263 aaKnown RBP17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 MAGEF1Q9HAY2 307 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 PDGFCQ9NRA1 345 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 STK17AQ9UEE5 414 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 TSKSQ9UJT2 592 aa17.76■□□□□ 0.43
TRAFD1-203ENST00000547063 EML1O00423 815 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 NOP56O00567 594 aaKnown RBP17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 NR1I2O75469 434 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 ARIH2O95376 493 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 ZNF865P0CJ78 1059 aaPredicted RBP17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 ADCYAP1R1P41586 468 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 ACTR2P61160 394 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 ZRSR1Q15695 479 aaKnown RBP17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 PDILTQ8N807 584 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 SEPT1Q8WYJ6 367 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 EMID1Q96A84 441 aaPredicted RBP17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 Q9Y3F1 56 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 TRIM17Q9Y577 477 aa17.75■□□□□ 0.43
TRAFD1-203ENST00000547063 CTAGE5O15320 804 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 ATG7O95352 703 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 CCNE2O96020 404 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 SLFN14P0C7P3 912 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 CYBAP13498 195 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 AKR1A1P14550 325 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 CAP1Q01518 475 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 CATSPER3Q86XQ3 398 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 ELOA2Q8IYF1 753 aaPredicted RBP17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 ATP6V0A1Q93050 837 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 DHX58Q96C10 678 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 SPATA33Q96N06 139 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 PANK2Q9BZ23 570 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 ZSWIM4Q9H7M6 989 aa17.74■□□□□ 0.43
TRAFD1-203ENST00000547063 SUPT20HL2P0C7V6 817 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 PLCG1P19174 1290 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 QARSP47897 775 aaKnown RBP17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 PSMC5P62195 406 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 GRB10Q13322 594 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 TMEM119Q4V9L6 283 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 BRDTQ58F21 947 aaPredicted RBP17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 ABHD15Q6UXT9 468 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 KRBA2Q6ZNG9 492 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 DYDC2Q96IM9 177 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 LRRC27Q9C0I9 530 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 DNM3Q9UQ16 869 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 DOCK5Q9H7D0 1870 aa17.73■□□□□ 0.43
TRAFD1-203ENST00000547063 BACH1O14867 736 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 MED24O75448 989 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 SLITRK3O94933 977 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 LETM1O95202 739 aaPredicted RBP17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 LYPLA2O95372 231 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 SPATA31C1P0DKV0 1188 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 SMPD1P17405 629 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 AMPD3Q01432 767 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 SP4Q02446 784 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 ARHGAP1Q07960 439 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 E2F4Q16254 413 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 PRAMEF19Q5SWL8 479 aa17.72■□□□□ 0.43
TRAFD1-203ENST00000547063 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms