RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 SEPT1Q8WYJ6 367 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 RAD9AQ99638 391 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 CERS4Q9HA82 394 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 JADE2Q9NQC1 790 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 NRCAMQ92823 1304 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 GSTTP1A0A1W2PQM5 241 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 EPOPA6NHQ4 379 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 GOLGA8AA7E2F4 631 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 GOLGA8BA8MQT2 603 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 hCG_1984214I3L0E3 225 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 RFXAPO00287 272 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 FOSP01100 380 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 PLEKHG4Q58EX7 1191 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 TYW1BQ6NUM6 668 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 ZNF713Q8N859 430 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 ARNTL2Q8WYA1 636 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 KCNB2Q92953 911 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 TSPYL2Q9H2G4 693 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 FAM217BQ9NTX9 383 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 MTCH2Q9Y6C9 303 aa16.47■□□□□ 0.23
COL2A1-209ENST00000546974 V9GY48 417 aaPredicted RBP16.47■□□□□ 0.23
COL2A1-209ENST00000546974 LCHNA4D1U4 455 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 ARHGAP4P98171 946 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
COL2A1-209ENST00000546974 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 MXRA8Q9BRK3 442 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 BARHL2Q9NY43 387 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 ERAP1Q9NZ08 941 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 NCOR1O75376 2440 aa16.46■□□□□ 0.23
COL2A1-209ENST00000546974 SMCO2A6NFE2 343 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 STXBP3O00186 592 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 AMHP03971 560 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 CDC27P30260 824 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 MRPS5P82675 430 aaKnown RBP16.45■□□□□ 0.22
COL2A1-209ENST00000546974 FAM26DQ5JW98 314 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.45■□□□□ 0.22
COL2A1-209ENST00000546974 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 MICALL1Q8N3F8 863 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 SEPT8Q92599 483 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 SMARCAD1Q9H4L7 1026 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 KCNH7Q9NS40 1196 aa16.45■□□□□ 0.22
COL2A1-209ENST00000546974 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 CTSHP09668 335 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 HSPA4P34932 840 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
COL2A1-209ENST00000546974 CLK2P49760 499 aaKnown RBP16.44■□□□□ 0.22
COL2A1-209ENST00000546974 ADCY7P51828 1080 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 FGD1P98174 961 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 AP3B2Q13367 1082 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 TAF2Q6P1X5 1199 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 GLG1Q92896 1179 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 ANO3Q9BYT9 981 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 JPH1Q9HDC5 661 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-209ENST00000546974 PKD2L1Q9P0L9 805 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 INSL6Q9Y581 213 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 SIP14410 1827 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 NFASCO94856 1347 aa16.44■□□□□ 0.22
COL2A1-209ENST00000546974 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL2A1-209ENST00000546974 ERVK-21P61565 698 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 PPFIA1Q13136 1202 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 GRB10Q13322 594 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 CEP55Q53EZ4 464 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 Q6ZUG5 572 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 MYOCDQ8IZQ8 938 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 FBXL16Q8N461 479 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 CYP2W1Q8TAV3 490 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 APBB2Q92870 758 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 PGBD1Q96JS3 809 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 JAKMIP1Q96N16 626 aaKnown RBP16.43■□□□□ 0.22
COL2A1-209ENST00000546974 TGS1Q96RS0 853 aaKnown RBP16.43■□□□□ 0.22
COL2A1-209ENST00000546974 LMCD1Q9NZU5 365 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-209ENST00000546974 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
COL2A1-209ENST00000546974 MBLAC1A4D2B0 266 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-209ENST00000546974 LINC01553A4QN01 128 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 LPXNO60711 386 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 CPA1P15085 419 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 MARK3P27448 753 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 SREBF1P36956 1147 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-209ENST00000546974 APOBRQ0VD83 1088 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 GRIK4Q16099 956 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 PFKFB3Q16875 520 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-209ENST00000546974 FAM117BQ6P1L5 589 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 BLOC1S2Q6QNY1 142 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
COL2A1-209ENST00000546974 TOP1MTQ969P6 601 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 PCYT2Q99447 389 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 OSBPL7Q9BZF2 842 aa16.42■□□□□ 0.22
COL2A1-209ENST00000546974 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms