RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 ADAM17P78536 824 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 RBM10P98175 930 aaKnown RBP12.63□□□□□ -0.39
TMEM116-203ENST00000546537 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
TMEM116-203ENST00000546537 MCF2L2Q86YR7 1114 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
TMEM116-203ENST00000546537 VN1R2Q8NFZ6 395 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 PANK1Q8TE04 598 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 LRRCC1Q9C099 1032 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 S1PR5Q9H228 398 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 SETD4Q9NVD3 440 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 PCDHGC5Q9Y5F6 944 aa12.63□□□□□ -0.39
TMEM116-203ENST00000546537 DOCK5Q9H7D0 1870 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 PER2O15055 1255 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 FOXP2O15409 715 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 SMARCA5O60264 1052 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-203ENST00000546537 BRD1O95696 1058 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 LGALS2P05162 132 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 GHRP10912 638 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 SP2Q02086 613 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 DUSP6Q16828 381 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 CRIPAKQ8N1N5 446 aa12.62□□□□□ -0.39
TMEM116-203ENST00000546537 CDCA3Q99618 268 aaPredicted RBP12.62□□□□□ -0.39
TMEM116-203ENST00000546537 TGFB3P10600 412 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
TMEM116-203ENST00000546537 UBA1P22314 1058 aaKnown RBP12.61□□□□□ -0.39
TMEM116-203ENST00000546537 CLCN5P51795 746 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 KCNC3Q14003 757 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 LPIN1Q14693 890 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 CDC37Q16543 378 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-203ENST00000546537 ZMYM1Q5SVZ6 1142 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
TMEM116-203ENST00000546537 TMEM184AQ6ZMB5 413 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 CNTNAP3BQ96NU0 1288 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 CNTNAP3Q9BZ76 1288 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 UBA5Q9GZZ9 404 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 CPVLQ9H3G5 476 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 WDR87Q6ZQQ6 2873 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 EPG5Q9HCE0 2579 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
TMEM116-203ENST00000546537 GOLGA8HP0CJ92 632 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 SP100P23497 879 aaPredicted RBP12.6□□□□□ -0.39
TMEM116-203ENST00000546537 UBE3AQ05086 875 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 MGAT3Q09327 533 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 PUM1Q14671 1186 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMEM116-203ENST00000546537 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 ANKRD54Q6NXT1 300 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 TTC14Q96N46 770 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 PDCD2LQ9BRP1 358 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
TMEM116-203ENST00000546537 NR2E1Q9Y466 385 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 LOXHD1Q8IVV2 1947 aa12.6□□□□□ -0.39
TMEM116-203ENST00000546537 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-203ENST00000546537 CFBP00751 764 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 SRGAP2BP0DMP2 458 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-203ENST00000546537 HSD17B4P51659 736 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 ARHGAP4P98171 946 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 GHRHRQ02643 423 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 PAN2Q504Q3 1202 aaKnown RBP12.59□□□□□ -0.39
TMEM116-203ENST00000546537 SYCE2Q6PIF2 218 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 VSIG10LQ86VR7 867 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 MICAL1Q8TDZ2 1067 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 LMBR1Q8WVP7 490 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 LINC01599Q8WXQ3 324 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
TMEM116-203ENST00000546537 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 SMOC2Q9H3U7 446 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 TOMM22Q9NS69 142 aa12.59□□□□□ -0.39
TMEM116-203ENST00000546537 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
TMEM116-203ENST00000546537 PPFIA3O75145 1194 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 TECP42680 631 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 PGM5Q15124 567 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 RRP12Q5JTH9 1297 aaKnown RBP12.58□□□□□ -0.4
TMEM116-203ENST00000546537 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 CWF19L1Q69YN2 538 aaKnown RBP12.58□□□□□ -0.4
TMEM116-203ENST00000546537 STOX1Q6ZVD7 989 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 RTN4RL1Q86UN2 441 aaPredicted RBP12.58□□□□□ -0.4
TMEM116-203ENST00000546537 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 RASGRP4Q8TDF6 673 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 MFSD1Q9H3U5 465 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 NRCAMQ92823 1304 aa12.58□□□□□ -0.4
TMEM116-203ENST00000546537 NCOR2Q9Y618 2525 aa12.57□□□□□ -0.4
TMEM116-203ENST00000546537 C2CD4DB7Z1M9 353 aa12.57□□□□□ -0.4
TMEM116-203ENST00000546537 NOP56O00567 594 aaKnown RBP12.57□□□□□ -0.4
TMEM116-203ENST00000546537 OPLAHO14841 1288 aa12.57□□□□□ -0.4
TMEM116-203ENST00000546537 FSCN2O14926 492 aa12.57□□□□□ -0.4
TMEM116-203ENST00000546537 LMNAP02545 664 aaKnown RBP12.57□□□□□ -0.4
TMEM116-203ENST00000546537 STAG3L1P0CL83 205 aa12.57□□□□□ -0.4
TMEM116-203ENST00000546537 HOXB8P17481 243 aaPredicted RBP12.57□□□□□ -0.4
TMEM116-203ENST00000546537 ERVFC1P60507 584 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms