RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 GLIS3Q8NEA6 775 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 ACTRT1Q8TDG2 376 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 RAD54LQ92698 747 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 DDX12PQ92771 950 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 P3H4Q92791 437 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 CALR3Q96L12 384 aaKnown RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 LZTS2Q9BRK4 669 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 LRRC27Q9C0I9 530 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 NEUROG2Q9H2A3 272 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 CNOT8Q9UFF9 292 aaKnown RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 ZNF335Q9H4Z2 1342 aaPredicted RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 STRCP1A6NGW2 1772 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 LAMB2P55268 1798 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 BTNL10A8MVZ5 291 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 PGRMC1O00264 195 aaKnown RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 CALCRLQ16602 461 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 IFI16Q16666 785 aaKnown RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 LACTB2Q53H82 288 aaPredicted RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 CPLX4Q7Z7G2 160 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 MAGEC3Q8TD91 643 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 TATDN2Q93075 761 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 AP1M1Q9BXS5 423 aa15.56■□□□□ 0.08
SRP54-202ENST00000546080 TPX2Q9ULW0 747 aaKnown RBP15.56■□□□□ 0.08
SRP54-202ENST00000546080 KLRF2D3W0D1 207 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 BACH1O14867 736 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 SART1O43290 800 aaKnown RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 ATP2C2O75185 946 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 EPS15P42566 896 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 NT5C2P49902 561 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 MAGOHP61326 146 aaKnown RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 TAX1BP1Q86VP1 789 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 MAGOHBQ96A72 148 aaKnown RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 DYNLL2Q96FJ2 89 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 AIPL1Q9NZN9 384 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 STX8Q9UNK0 236 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 NOC2LQ9Y3T9 749 aaKnown RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.55■□□□□ 0.08
SRP54-202ENST00000546080 PRDX5P30044 214 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 SLC8A1P32418 973 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.082e-6■■■□□ 15.9
SRP54-202ENST00000546080 BYSLQ13895 437 aaKnown RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 ZCWPW2Q504Y3 356 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 C10orf76Q5T2E6 689 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 FAM228AQ86W67 206 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 PROCA1Q8NCQ7 364 aaPredicted RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 SNX29Q8TEQ0 813 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 RAB34Q9BZG1 259 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 DDX47Q9H0S4 455 aaKnown RBP15.55■□□□□ 0.08
SRP54-202ENST00000546080 SWAP70Q9UH65 585 aa15.55■□□□□ 0.08
SRP54-202ENST00000546080 CCDC188H7C350 402 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 CAMTA2O94983 1202 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 GNA14O95837 355 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 FLT3P36888 993 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 XRCC4Q13426 336 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 KRT71Q3SY84 523 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 C12orf60Q5U649 245 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 BANK1Q8NDB2 785 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 HVCN1Q96D96 273 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 CEP63Q96MT8 703 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 TMEM47Q9BQJ4 181 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.54■□□□□ 0.08
SRP54-202ENST00000546080 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 CPVLQ9H3G5 476 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 BIN2Q9UBW5 565 aaPredicted RBP15.54■□□□□ 0.08
SRP54-202ENST00000546080 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.54■□□□□ 0.08
SRP54-202ENST00000546080 CCDC88AQ3V6T2 1871 aa15.54■□□□□ 0.08
SRP54-202ENST00000546080 POTEMA6NI47 508 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 BHMG1C9JSJ3 638 aaPredicted RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 KRIT1O00522 736 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 DAPK3O43293 454 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 SCP2P22307 547 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 COASYQ13057 564 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 PTPROQ16827 1216 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 TMC3Q7Z5M5 1100 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 REXO1Q8N1G1 1221 aaKnown RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 MIEF2Q96C03 454 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 MTMR9Q96QG7 549 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 PSMD1Q99460 953 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 KDM4CQ9H3R0 1056 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 CNOT10Q9H9A5 744 aaKnown RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 BSDC1Q9NW68 430 aaPredicted RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 SEC63Q9UGP8 760 aaKnown RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 MINPP1Q9UNW1 487 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 A0A0G2JS52 829 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 DNAJC8O75937 253 aaPredicted RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 GHRP10912 638 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 GCFC2P16383 781 aaKnown RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 E2F5Q15329 346 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 FBXO33Q7Z6M2 555 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 TRIM59Q8IWR1 403 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
SRP54-202ENST00000546080 CCDC26Q8TAB7 109 aa15.53■□□□□ 0.08
SRP54-202ENST00000546080 CCT6BQ92526 530 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms