RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PTPRN2Q92932 1015 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 CD244Q9BZW8 370 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 PDGFDQ9GZP0 370 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-224ENST00000545688 TMEM168Q9H0V1 697 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 DLL4Q9NR61 685 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 KDM2BQ8NHM5 1336 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 TCRBV5S4A2TA0A5A2 114 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 FAM221BA6H8Z2 402 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 AQP7O14520 342 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 COL6A1P12109 1028 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 EPHA5P54756 1037 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 PAK1Q13153 545 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 CD276Q5ZPR3 534 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 IPO9Q96P70 1041 aaKnown RBP7.37□□□□□ -1.23
SNHG1-224ENST00000545688 DEPDC7Q96QD5 511 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 FTSJ1Q9UET6 329 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 PCDHA8Q9Y5H6 950 aa7.37□□□□□ -1.23
SNHG1-224ENST00000545688 ACOT7O00154 380 aa7.36□□□□□ -1.23
SNHG1-224ENST00000545688 CKMP06732 381 aa7.36□□□□□ -1.23
SNHG1-224ENST00000545688 RBL2Q08999 1139 aa7.36□□□□□ -1.23
SNHG1-224ENST00000545688 SKIDA1Q1XH10 827 aa7.36□□□□□ -1.23
SNHG1-224ENST00000545688 ARMC5Q96C12 935 aa7.36□□□□□ -1.23
SNHG1-224ENST00000545688 SNTG2Q9NY99 539 aa7.36□□□□□ -1.23
SNHG1-224ENST00000545688 ZNF536O15090 1300 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 GLRBP48167 497 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 GUCY1A3Q02108 690 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 ZNF827Q17R98 1081 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 PKN3Q6P5Z2 889 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 NUDT10Q8NFP7 164 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 NUDT11Q96G61 164 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 DHRS4Q9BTZ2 278 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 ZFP69BQ9UJL9 534 aa7.35□□□□□ -1.23
SNHG1-224ENST00000545688 MRPS23Q9Y3D9 190 aaKnown RBP7.35□□□□□ -1.23
SNHG1-224ENST00000545688 ARVCFO00192 962 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 WNT9AO14904 365 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 GABREP78334 506 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 PFKPQ01813 784 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 SMAD2Q15796 467 aaKnown RBP7.34□□□□□ -1.23
SNHG1-224ENST00000545688 ARHGAP36Q6ZRI8 547 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 KLHL36Q8N4N3 616 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 FBXW5Q969U6 566 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 SSBP3Q9BWW4 388 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-224ENST00000545688 SMPD4Q9NXE4 827 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 SRPK3Q9UPE1 567 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 PCDHA9Q9Y5H5 950 aa7.34□□□□□ -1.23
SNHG1-224ENST00000545688 ZNF839A8K0R7 811 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 LAMTOR5O43504 91 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 KLHL18O94889 574 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 FBXO21O94952 628 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 ENO2P09104 434 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-224ENST00000545688 SRGAP2CP0DJJ0 459 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 PYGMP11217 842 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 MAGEA10P43363 369 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-224ENST00000545688 NFATC3Q12968 1075 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 GPR19Q15760 415 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 LONRF2Q1L5Z9 754 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 DBX2Q6ZNG2 339 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 LRP10Q7Z4F1 713 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 PLEKHH3Q7Z736 793 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 GGNQ86UU5 652 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 KBTBD2Q8IY47 623 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 STPG3Q8N7X2 389 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 IGDCC4Q8TDY8 1250 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 KISS1RQ969F8 398 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-224ENST00000545688 LOXL4Q96JB6 756 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 KCND1Q9NSA2 647 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 CATSPERZQ9NTU4 200 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 ARHGAP20Q9P2F6 1191 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 CBLCQ9ULV8 474 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 JAG2Q9Y219 1238 aa7.33□□□□□ -1.24
SNHG1-224ENST00000545688 KNG1P01042 644 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 AMY2AP04746 511 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 PDE6AP16499 860 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 AMY2BP19961 511 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 SURF1Q15526 300 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 BTBD8Q5XKL5 378 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 LIMS2Q7Z4I7 341 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 OSTM1Q86WC4 334 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 DNAJC7Q99615 494 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 BARX1Q9HBU1 254 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-224ENST00000545688 SLC39A2Q9NP94 309 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 PPP4R1LQ9P1A2 415 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 ZDHHC9Q9Y397 364 aa7.32□□□□□ -1.24
SNHG1-224ENST00000545688 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-224ENST00000545688 FAM90A27PA6NNH2 459 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 MAN2B1O00754 1011 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 CRTAMO95727 393 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 IL18BPO95998 194 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 KRT15P19012 456 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 ADAM17P78536 824 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 GLB1LQ6UWU2 654 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 C16orf59Q7L2K0 433 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 PTRH1Q86Y79 214 aaKnown RBP7.31□□□□□ -1.24
SNHG1-224ENST00000545688 SAMD11Q96NU1 681 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 SRPK1Q96SB4 655 aaKnown RBP7.31□□□□□ -1.24
SNHG1-224ENST00000545688 TACO1Q9BSH4 297 aaKnown RBP7.31□□□□□ -1.24
SNHG1-224ENST00000545688 RIC8BQ9NVN3 520 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 ADAM29Q9UKF5 820 aa7.31□□□□□ -1.24
SNHG1-224ENST00000545688 B4GALT4O60513 344 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms