RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KIAA0100Q14667 2235 aaKnown RBP16.33■□□□□ 0.21
TNFRSF1A-216ENST00000543995 ELP1O95163 1332 aa16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 KPNA6O60684 536 aa16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 BMP15O95972 392 aa16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ASGR1P07306 291 aa16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 UTP14CQ5TAP6 766 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TSEN34Q9BSV6 310 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 UNC45AQ9H3U1 944 aa16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CIZ1Q9ULV3 898 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 BRCA2P51587 3418 aa16.33■□□□□ 0.2
TNFRSF1A-216ENST00000543995 GSTTP1A0A1W2PQM5 241 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MOXD2PA6NHM9 499 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CCNE2O96020 404 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ZNF286BP0CG31 522 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TECP42680 631 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ACLYP53396 1101 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TMEM266Q2M3C6 531 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CCSAPQ6IQ19 270 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MIS18BP1Q6P0N0 1132 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CXCL17Q6UXB2 119 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MIER3Q7Z3K6 550 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SMAP1Q8IYB5 467 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 FERMT2Q96AC1 680 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 VTI1AQ96AJ9 217 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 USP28Q96RU2 1077 aa16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TFIP11Q9UBB9 837 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-216ENST00000543995 WDR64B1ANS9 1081 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 BACH1O14867 736 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SFNP31947 248 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 JAK3P52333 1124 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 NCAPH2Q6IBW4 605 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 GLT1D1Q96MS3 346 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MTG1Q9BT17 334 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 VAV3Q9UKW4 847 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PCDHA10Q9Y5I2 948 aa16.31■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CABYRO75952 493 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 LGALS2P05162 132 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PSAPP07602 524 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SUPT20HL2P0C7V6 817 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PRPHP41219 470 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PURAQ00577 322 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 DTHD1Q6ZMT9 781 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 DIS3LQ8TF46 1054 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 GLG1Q92896 1179 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SENP6Q9GZR1 1112 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 CFAP45Q9UL16 551 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ZNF215Q9UL58 517 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PHF24Q9UPV7 400 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MYH9P35579 1960 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-216ENST00000543995 A0A1W2PQ45 241 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 A0A1W2PQY0 241 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 POTEMA6NI47 508 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ATG7O95352 703 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 STK38Q15208 465 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ARL6IP4Q66PJ3 421 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ATL3Q6DD88 541 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ABHD15Q6UXT9 468 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 NECAB2Q7Z6G3 386 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TRIM50Q86XT4 487 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 RDM1Q8NG50 284 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PAWRQ96IZ0 340 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 KATNAL1Q9BW62 490 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 C11orf49Q9H6J7 331 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 ZNF302Q9NR11 478 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 VWA3AA6NCI4 1184 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 H3BRB1 525 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 EML1O00423 815 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 STAT5BP51692 787 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 KRT85P78386 507 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SMARCAD1Q9H4L7 1026 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 TCHHQ07283 1943 aa16.29■□□□□ 0.2
TNFRSF1A-216ENST00000543995 EMSYQ7Z589 1322 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 LGR5O75473 907 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 MARK3P27448 753 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 PSMC6P62333 389 aa16.28■□□□□ 0.2
TNFRSF1A-216ENST00000543995 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 529 ms