RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 CPXCR1Q8N123 301 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 ACRBPQ8NEB7 543 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 ZNF397Q8NF99 534 aaPredicted RBP18.9■□□□□ 0.62
PTPRO-209ENST00000543886 SCFD1Q8WVM8 642 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 CEP63Q96MT8 703 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 COL4A3BPQ9Y5P4 624 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 ZNF541Q9H0D2 1346 aa18.9■□□□□ 0.62
PTPRO-209ENST00000543886 KIF5CO60282 957 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 TBCAO75347 108 aaKnown RBP18.89■□□□□ 0.62
PTPRO-209ENST00000543886 ALAS1P13196 640 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 VCAM1P19320 739 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 USP14P54578 494 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 ZBED6P86452 979 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 CTTNQ14247 550 aaKnown RBP18.89■□□□□ 0.62
PTPRO-209ENST00000543886 ARHGAP29Q52LW3 1261 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 FIGNQ5HY92 759 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 TPH2Q8IWU9 490 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 WDR24Q96S15 920 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 HSD17B14Q9BPX1 270 aa18.89■□□□□ 0.62
PTPRO-209ENST00000543886 CCDC94Q9BW85 323 aaPredicted RBP18.89■□□□□ 0.62
PTPRO-209ENST00000543886 A0A1W2PQJ5 194 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 NFIBO00712 420 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 GNA14O95837 355 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 DGKZQ13574 1117 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 PPP4R3CPQ6ZMV5 832 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 SFR1Q86XK3 245 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 APOBEC3FQ8IUX4 373 aaKnown RBP18.89■□□□□ 0.61
PTPRO-209ENST00000543886 SMAP1Q8IYB5 467 aaPredicted RBP18.89■□□□□ 0.61
PTPRO-209ENST00000543886 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 CHP1Q99653 195 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 TEKT3Q9BXF9 490 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 SLC38A10Q9HBR0 1119 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 RAVER2Q9HCJ3 691 aaKnown RBP18.89■□□□□ 0.61
PTPRO-209ENST00000543886 AGPAT5Q9NUQ2 364 aa18.89■□□□□ 0.61
PTPRO-209ENST00000543886 RBBP6Q7Z6E9 1792 aaKnown RBP18.89■□□□□ 0.61
PTPRO-209ENST00000543886 RASSF10A6NK89 507 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 NKRFO15226 690 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTPRO-209ENST00000543886 FANCGO15287 622 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 ARP10275 920 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 ZFP91Q96JP5 570 aaPredicted RBP18.88■□□□□ 0.61
PTPRO-209ENST00000543886 MXRA8Q9BRK3 442 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 RPAP3Q9H6T3 665 aaPredicted RBP18.88■□□□□ 0.61
PTPRO-209ENST00000543886 PPP1R9AQ9ULJ8 1098 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 RPTORQ8N122 1335 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 IPO5O00410 1097 aaKnown RBP18.88■□□□□ 0.61
PTPRO-209ENST00000543886 NDUFA10O95299 355 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 SCYL3Q8IZE3 742 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 RUSC1Q9BVN2 902 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 KCTD10Q9H3F6 313 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 AS3MTQ9HBK9 375 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 PICK1Q9NRD5 415 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 HOMER2Q9NSB8 354 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 PNMA2Q9UL42 364 aa18.88■□□□□ 0.61
PTPRO-209ENST00000543886 EPN1Q9Y6I3 576 aaPredicted RBP18.88■□□□□ 0.61
PTPRO-209ENST00000543886 UTRNP46939 3433 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 ZBED4O75132 1171 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 SLITRK3O94933 977 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 MUTP22033 750 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 MEA1Q16626 185 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 ANGEL2Q5VTE6 544 aaKnown RBP18.87■□□□□ 0.61
PTPRO-209ENST00000543886 UNC45AQ9H3U1 944 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 SIK3Q9Y2K2 1263 aa18.87■□□□□ 0.61
PTPRO-209ENST00000543886 SPP2Q13103 211 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 NAA30Q147X3 362 aaPredicted RBP18.86■□□□□ 0.61
PTPRO-209ENST00000543886 EDRF1Q3B7T1 1238 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 WDR59Q6PJI9 974 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 PIGOQ8TEQ8 1089 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 WRNIP1Q96S55 665 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 RIT2Q99578 217 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 A0A0U1RQJ8 604 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 GAP43P17677 238 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 ERCC3P19447 782 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 CASP5P51878 434 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 GHRHRQ02643 423 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 EPHA7Q15375 998 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 RINT1Q6NUQ1 792 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 ATRIPQ8WXE1 791 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 MMRN2Q9H8L6 949 aa18.86■□□□□ 0.61
PTPRO-209ENST00000543886 FAM207AQ9NSI2 230 aaPredicted RBP18.86■□□□□ 0.61
PTPRO-209ENST00000543886 MAP3K20Q9NYL2 800 aaKnown RBP18.86■□□□□ 0.61
PTPRO-209ENST00000543886 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.86■□□□□ 0.61
PTPRO-209ENST00000543886 V9GYY5 206 aaPredicted RBP18.86■□□□□ 0.61
PTPRO-209ENST00000543886 BCRP11274 1271 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 ITGB5P18084 799 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 CYLC1P35663 651 aaPredicted RBP18.85■□□□□ 0.61
PTPRO-209ENST00000543886 MUM1L1Q5H9M0 696 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 NIPA1Q7RTP0 329 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 PDCL2Q8N4E4 241 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 SAMD3Q8N6K7 520 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 NACC1Q96RE7 527 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 IRX2Q9BZI1 471 aaPredicted RBP18.85■□□□□ 0.61
PTPRO-209ENST00000543886 RSPH10B2B2RC85 870 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 CETN3O15182 167 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 FAM13AO94988 1023 aa18.85■□□□□ 0.61
PTPRO-209ENST00000543886 RSPH10BP0C881 870 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms