RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 BUB1O43683 1085 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 USP8P40818 1118 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 CARSP49589 748 aaKnown RBP15.09■□□□□ 0.01
VPS33A-208ENST00000543633 NAP1L1P55209 391 aaKnown RBP15.09■□□□□ 0.01
VPS33A-208ENST00000543633 POLR2FP61218 127 aaKnown RBP15.09■□□□□ 0.01
VPS33A-208ENST00000543633 CUL1Q13616 776 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
VPS33A-208ENST00000543633 KCNK18Q7Z418 384 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 YY1AP1Q9H869 796 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 EPB41L5Q9HCM4 733 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 PLCB1Q9NQ66 1216 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 SMARCAL1Q9NZC9 954 aa15.09■□□□□ 0.01
VPS33A-208ENST00000543633 GREB1LQ9C091 1923 aaPredicted RBP15.08■□□□□ 0.01
VPS33A-208ENST00000543633 MYH4Q9Y623 1939 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0
VPS33A-208ENST00000543633 FRMD3A2A2Y4 597 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 USP17L5A8MUK1 530 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 GUCY2DQ02846 1103 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 ARFGAP2Q8N6H7 521 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 ANKRD13CQ8N6S4 541 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 C3orf20Q8ND61 904 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 TAF4BQ92750 862 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 PSMB7Q99436 277 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 ISCUQ9H1K1 167 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 EPN3Q9H201 632 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 NFU1Q9UMS0 254 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 JAG2Q9Y219 1238 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 PCDHA2Q9Y5H9 948 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 QSER1Q2KHR3 1735 aa15.08■□□□□ 0
VPS33A-208ENST00000543633 IGKV6D-41A0A0C4DH26 115 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 PNMA6FA0A0J9YX94 578 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 ZNF233A6NK53 670 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 NDUFAB1O14561 156 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 APBA3O96018 575 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 NR1D1P20393 614 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 KLRC1P26715 233 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 INPP5BP32019 993 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 RFC4P35249 363 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 KLHL30Q0D2K2 578 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 MICALL1Q8N3F8 863 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 ACTRT1Q8TDG2 376 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 PIK3R5Q8WYR1 880 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 CUL5Q93034 780 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 MS4A14Q96JA4 679 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 ATP6V1G3Q96LB4 118 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 KCTD10Q9H3F6 313 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 TAF1DQ9H5J8 278 aaPredicted RBP15.07■□□□□ 0
VPS33A-208ENST00000543633 MTMR4Q9NYA4 1195 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 DDX25Q9UHL0 483 aaKnown RBP15.07■□□□□ 0
VPS33A-208ENST00000543633 IL1R1P14778 569 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 USP11P51784 963 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 RHBDL3P58872 404 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 KIAA0753Q2KHM9 967 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 CASKIN2Q8WXE0 1202 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 TBC1D5Q92609 795 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 FBXL5Q9UKA1 691 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 RGPD3A6NKT7 1758 aaPredicted RBP15.07■□□□□ 0
VPS33A-208ENST00000543633 RGPD4Q7Z3J3 1758 aa15.07■□□□□ 0
VPS33A-208ENST00000543633 KIAA0754O94854 1291 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 FTCDO95954 541 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 LSP1P33241 339 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 MRPL12P52815 198 aaKnown RBP15.06■□□□□ 0
VPS33A-208ENST00000543633 ATP2B2Q01814 1243 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 PDCLQ13371 301 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 RAPGEF1Q13905 1077 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 LRRC41Q15345 812 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 GRIK5Q16478 980 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 CNPY4Q8N129 248 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 TBC1D22AQ8WUA7 517 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 HAS1Q92839 578 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 LRRC45Q96CN5 670 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 KRT12Q99456 494 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 MXD3Q9BW11 206 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 VAT1LQ9HCJ6 419 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 INTUQ9ULD6 942 aa15.06■□□□□ 0
VPS33A-208ENST00000543633 A0A087X0T9 212 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 A0A0A6YYK5 440 aaPredicted RBP15.05■□□□□ 0
VPS33A-208ENST00000543633 CCDC188H7C350 402 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 CETN3O15182 167 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 PPP1R37O75864 691 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 FSBPO95073 299 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 FAM228BP0C875 321 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 GUCY2CP25092 1073 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 PRKCIP41743 596 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 EPS15P42566 896 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 TNNI2P48788 182 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 RPS6KA1Q15418 735 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 SWT1Q5T5J6 900 aaKnown RBP15.05■□□□□ 0
VPS33A-208ENST00000543633 MOXD1Q6UVY6 613 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 FRMD5Q7Z6J6 570 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 GLIS3Q8NEA6 775 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 COA7Q96BR5 231 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 CEP89Q96ST8 783 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 UBA5Q9GZZ9 404 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 STK24Q9Y6E0 443 aa15.05■□□□□ 0
VPS33A-208ENST00000543633 GOLGA6L10A6NI86 522 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms