RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 HMGCRP04035 888 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 MUTP22033 750 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 EPHA7Q15375 998 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 DUSP28Q4G0W2 176 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 SPECC1Q5M775 1068 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 CELF3Q5SZQ8 465 aaKnown RBP18.01■□□□□ 0.47
TRIM65-204ENST00000543309 HYIQ5T013 277 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 NCAPH2Q6IBW4 605 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 USP49Q70CQ1 688 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 ENGASEQ8NFI3 743 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 RAET1EQ8TD07 263 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 NEK9Q8TD19 979 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 UIMC1Q96RL1 719 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 MMTAG2Q9BU76 263 aaKnown RBP18.01■□□□□ 0.47
TRIM65-204ENST00000543309 POLR3CQ9BUI4 534 aaPredicted RBP18.01■□□□□ 0.47
TRIM65-204ENST00000543309 PDGFCQ9NRA1 345 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 CCDC39Q9UFE4 941 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
TRIM65-204ENST00000543309 PTCH2Q9Y6C5 1203 aa18.01■□□□□ 0.47
TRIM65-204ENST00000543309 A0A1B0GVL5 298 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 PP2D1A8MPX8 630 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 GGPS1O95749 300 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 CCNE2O96020 404 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 CYBAP13498 195 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 RPA1P27694 616 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 NDUFA8P51970 172 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 LY6KQ17RY6 165 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 KLHL40Q2TBA0 621 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 CCDC144BQ3MJ40 725 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 SLC9C1Q4G0N8 1177 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 CYFIP1Q7L576 1253 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 MIER3Q7Z3K6 550 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 CABP7Q86V35 215 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 FMR1NBQ8N0W7 255 aaPredicted RBP18■□□□□ 0.47
TRIM65-204ENST00000543309 SLAIN1Q8ND83 568 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 GPT2Q8TD30 523 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 SNX29Q8TEQ0 813 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 CALML4Q96GE6 196 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 NT5C3AQ9H0P0 336 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 TUFT1Q9NNX1 390 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 USP25Q9UHP3 1055 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 DOCK5Q9H7D0 1870 aa18■□□□□ 0.47
TRIM65-204ENST00000543309 DDX39AO00148 427 aaKnown RBP17.99■□□□□ 0.47
TRIM65-204ENST00000543309 EML1O00423 815 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 ATG7O95352 703 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 GH1P01241 217 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 LIG1P18858 919 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 EN2P19622 333 aaPredicted RBP17.99■□□□□ 0.47
TRIM65-204ENST00000543309 ADCYAP1R1P41586 468 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 SYKP43405 635 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 SNW1Q13573 536 aaKnown RBP17.99■□□□□ 0.47
TRIM65-204ENST00000543309 LAMC2Q13753 1193 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 HSD17B14Q9BPX1 270 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 EIF2AK1Q9BQI3 630 aaKnown RBP17.99■□□□□ 0.47
TRIM65-204ENST00000543309 TMEM106CQ9BVX2 250 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 MLXIPQ9HAP2 919 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 DISC1Q9NRI5 854 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 Q9Y3F1 56 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 PCDHA10Q9Y5I2 948 aa17.99■□□□□ 0.47
TRIM65-204ENST00000543309 CHMP2AO43633 222 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 CDC25AP30304 524 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
TRIM65-204ENST00000543309 ACTR2P61160 394 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 TNFAIP2Q03169 654 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 MAP3K21Q5TCX8 1036 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 DHX37Q8IY37 1157 aaKnown RBP17.98■□□□□ 0.47
TRIM65-204ENST00000543309 TIGD1Q96MW7 591 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 CUEDC2Q9H467 287 aa17.98■□□□□ 0.47
TRIM65-204ENST00000543309 DDX19AQ9NUU7 478 aaKnown RBP17.98■□□□□ 0.47
TRIM65-204ENST00000543309 NR1I2O75469 434 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 ZNF202O95125 648 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 P4HBP07237 508 aaKnown RBP17.97■□□□□ 0.47
TRIM65-204ENST00000543309 PSAPP07602 524 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 SPATA31C1P0DKV0 1188 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 AKR1A1P14550 325 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 SMPD1P17405 629 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 ARHGAP1Q07960 439 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 E2F4Q16254 413 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 TMEM119Q4V9L6 283 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 MIS18BP1Q6P0N0 1132 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 ABHD15Q6UXT9 468 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 CATSPER3Q86XQ3 398 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 IQUBQ8NA54 791 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 CDK5RAP3Q96JB5 506 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 BCAS3Q9H6U6 928 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 MAGEF1Q9HAY2 307 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 STK17AQ9UEE5 414 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 GNEQ9Y223 722 aaKnown RBP17.97■□□□□ 0.47
TRIM65-204ENST00000543309 SAMM50Q9Y512 469 aa17.97■□□□□ 0.47
TRIM65-204ENST00000543309 A0A087X0B3 334 aa17.96■□□□□ 0.47
TRIM65-204ENST00000543309 IGKV6D-21A0A0A0MT36 114 aa17.96■□□□□ 0.47
TRIM65-204ENST00000543309 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.96■□□□□ 0.47
TRIM65-204ENST00000543309 POLR2DO15514 142 aaKnown RBP17.96■□□□□ 0.47
TRIM65-204ENST00000543309 SEPT4O43236 478 aa17.96■□□□□ 0.47
TRIM65-204ENST00000543309 TRAK2O60296 914 aa17.96■□□□□ 0.47
TRIM65-204ENST00000543309 DKC1O60832 514 aaKnown RBP eCLIP17.96■□□□□ 0.47
TRIM65-204ENST00000543309 KINO60870 393 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms