RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ARHGAP27Q6ZUM4 889 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 C3orf67Q6ZVT6 689 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 KCNK18Q7Z418 384 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 RAD54LQ92698 747 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 TBC1D7Q9P0N9 293 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 ASIC2Q16515 512 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 WLSQ5T9L3 541 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 FAM228AQ86W67 206 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 SLC44A5Q8NCS7 719 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 PHF20L1A8MW92 1017 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 CAMTA2O94983 1202 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 MAGOHP61326 146 aaKnown RBP25.98■■□□□ 1.75
SHD-201ENST00000543264 INTS5Q6P9B9 1019 aaKnown RBP25.98■■□□□ 1.75
SHD-201ENST00000543264 BRINP3Q76B58 766 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 CPLX4Q7Z7G2 160 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 ZNF444Q8N0Y2 327 aaPredicted RBP25.98■■□□□ 1.75
SHD-201ENST00000543264 C3orf20Q8ND61 904 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 MAGOHBQ96A72 148 aaKnown RBP25.98■■□□□ 1.75
SHD-201ENST00000543264 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.98■■□□□ 1.75
SHD-201ENST00000543264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.98■■□□□ 1.75
SHD-201ENST00000543264 C21orf2O43822 256 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 SCTRP47872 440 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 FBXO33Q7Z6M2 555 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 PROM2Q8N271 834 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 EIF1ADQ8N9N8 165 aaKnown RBP25.98■■□□□ 1.75
SHD-201ENST00000543264 SNX29Q8TEQ0 813 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 SGSM3Q96HU1 749 aa25.98■■□□□ 1.75
SHD-201ENST00000543264 DAPK3O43293 454 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 HSPA2P54652 639 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 BYSLQ13895 437 aaKnown RBP25.97■■□□□ 1.75
SHD-201ENST00000543264 NELFCDQ8IXH7 590 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 PBKQ96KB5 322 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 TPX2Q9ULW0 747 aaKnown RBP25.97■■□□□ 1.75
SHD-201ENST00000543264 TMCO5BA8MYB1 307 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 USP11P51784 963 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 PSMD2Q13200 908 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 E2F5Q15329 346 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 MTMR9Q96QG7 549 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 BSDC1Q9NW68 430 aaPredicted RBP25.97■■□□□ 1.75
SHD-201ENST00000543264 AMACRQ9UHK6 382 aa25.97■■□□□ 1.75
SHD-201ENST00000543264 MYH4Q9Y623 1939 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 TAF1P21675 1872 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 DCCP43146 1447 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 TMEM266Q2M3C6 531 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 CCDC87Q9NVE4 849 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 KRIT1O00522 736 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 KIF1CO43896 1103 aaKnown RBP25.96■■□□□ 1.75
SHD-201ENST00000543264 SCP2P22307 547 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 KRT71Q3SY84 523 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 AGBL2Q5U5Z8 902 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 REXO1Q8N1G1 1221 aaKnown RBP25.96■■□□□ 1.75
SHD-201ENST00000543264 VEZTQ9HBM0 779 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 AIPL1Q9NZN9 384 aa25.96■■□□□ 1.75
SHD-201ENST00000543264 SLC37A4O43826 429 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 ZCWPW2Q504Y3 356 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 GKAP1Q5VSY0 366 aaPredicted RBP25.95■■□□□ 1.74
SHD-201ENST00000543264 USP17L2Q6R6M4 530 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 ACTRT1Q8TDG2 376 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 LAMB1P07942 1786 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 PGRMC1O00264 195 aaKnown RBP25.95■■□□□ 1.74
SHD-201ENST00000543264 CES2O00748 559 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 OPLAHO14841 1288 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 ITGA4P13612 1032 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 EPS15P42566 896 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 CRKLP46109 303 aaKnown RBP25.95■■□□□ 1.74
SHD-201ENST00000543264 PTK2Q05397 1052 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 COASYQ13057 564 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 KRT79Q5XKE5 535 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 METTL13Q8N6R0 699 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 LZTS2Q9BRK4 669 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 LRRC4CQ9HCJ2 640 aa25.95■■□□□ 1.74
SHD-201ENST00000543264 NOC2LQ9Y3T9 749 aaKnown RBP25.95■■□□□ 1.74
SHD-201ENST00000543264 TDP2O95551 362 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 MTMR3Q13615 1198 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 CCDC50Q8IVM0 306 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 MDM1Q8TC05 714 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 TATDN2Q93075 761 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 FGFBP2Q9BYJ0 223 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 SEC63Q9UGP8 760 aaKnown RBP25.94■■□□□ 1.74
SHD-201ENST00000543264 C5orf60A6NFR6 353 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 CELF1Q92879 486 aaKnown RBP25.94■■□□□ 1.74
SHD-201ENST00000543264 PIGSQ96S52 555 aa25.94■■□□□ 1.74
SHD-201ENST00000543264 HIBADHP31937 336 aaKnown RBP25.93■■□□□ 1.74
SHD-201ENST00000543264 FXR2P51116 673 aaKnown RBP eCLIP25.93■■□□□ 1.74
SHD-201ENST00000543264 DHX9Q08211 1270 aaKnown RBP25.93■■□□□ 1.74
SHD-201ENST00000543264 SF3A3Q12874 501 aaKnown RBP eCLIP25.93■■□□□ 1.74
SHD-201ENST00000543264 ERFEQ4G0M1 354 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 DZIP1Q86YF9 867 aaKnown RBP25.93■■□□□ 1.74
SHD-201ENST00000543264 TRIM59Q8IWR1 403 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 HVCN1Q96D96 273 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.93■■□□□ 1.74
SHD-201ENST00000543264 SPZ1Q9BXG8 430 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 DPH5Q9H2P9 285 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 PANK4Q9NVE7 773 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 ACTN1P12814 892 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 ECM1Q16610 540 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 FAM26FQ5R3K3 315 aa25.93■■□□□ 1.74
SHD-201ENST00000543264 ZNF571Q7Z3V5 609 aaPredicted RBP25.93■■□□□ 1.74
SHD-201ENST00000543264 TTI1O43156 1089 aa25.92■■□□□ 1.74
SHD-201ENST00000543264 EZRP15311 586 aaKnown RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms