RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 CHMP5Q9NZZ3 219 aa13.74□□□□□ -0.21
DDX55-210ENST00000543016 PKD2L1Q9P0L9 805 aa13.74□□□□□ -0.21
DDX55-210ENST00000543016 PHF24Q9UPV7 400 aa13.74□□□□□ -0.21
DDX55-210ENST00000543016 PCDHA10Q9Y5I2 948 aa13.74□□□□□ -0.21
DDX55-210ENST00000543016 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.215e-33■■■■■ 32.3
DDX55-210ENST00000543016 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX55-210ENST00000543016 ACTR2P61160 394 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 PKP1Q13835 747 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 PDIA5Q14554 519 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 KCNA10Q16322 511 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 HSDL1Q3SXM5 330 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
DDX55-210ENST00000543016 MTG1Q9BT17 334 aaPredicted RBP13.73□□□□□ -0.21
DDX55-210ENST00000543016 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
DDX55-210ENST00000543016 ZDHHC9Q9Y397 364 aa13.73□□□□□ -0.21
DDX55-210ENST00000543016 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 WNT7AO00755 349 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 LGR5O75473 907 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 YEATS4O95619 227 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 PSAPP07602 524 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 TXKP42681 527 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 NASPP49321 788 aaPredicted RBP13.72□□□□□ -0.21
DDX55-210ENST00000543016 ACLYP53396 1101 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 SLC39A14Q15043 492 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 SF3A1Q15459 793 aaKnown RBP13.72□□□□□ -0.21
DDX55-210ENST00000543016 FAM160B1Q5W0V3 765 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 ABHD15Q6UXT9 468 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 NEK9Q8TD19 979 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 GLT1D1Q96MS3 346 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 TMEM60Q9H2L4 133 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 SMARCAD1Q9H4L7 1026 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 DISC1Q9NRI5 854 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
DDX55-210ENST00000543016 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
DDX55-210ENST00000543016 EMSYQ7Z589 1322 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 SLC26A4O43511 780 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 CCNE2O96020 404 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 ASGR1P07306 291 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 SUPT20HL2P0C7V6 817 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
DDX55-210ENST00000543016 KRT85P78386 507 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.21
DDX55-210ENST00000543016 BEX3Q00994 111 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 NBR1Q14596 966 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 EPHA7Q15375 998 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
DDX55-210ENST00000543016 MIER3Q7Z3K6 550 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 NECAB2Q7Z6G3 386 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 KCTD17Q8N5Z5 321 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 ERMNQ8TAM6 284 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
DDX55-210ENST00000543016 AK8Q96MA6 479 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 USP28Q96RU2 1077 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 SAMM50Q9Y512 469 aa13.71□□□□□ -0.21
DDX55-210ENST00000543016 MYADML2A6NDP7 307 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 DDX39AO00148 427 aaKnown RBP13.7□□□□□ -0.22
DDX55-210ENST00000543016 PPP6R2O75170 966 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 F2P00734 622 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 LGALS2P05162 132 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 MYL3P08590 195 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 MUTP22033 750 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 STAT5BP51692 787 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 SP4Q02446 784 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 PTPN11Q06124 597 aaPredicted RBP13.7□□□□□ -0.22
DDX55-210ENST00000543016 SPIRE1Q08AE8 756 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 STK38Q15208 465 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 PTPAQ15257 358 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 FAM173BQ6P4H8 233 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 LINC00301Q8NCQ3 95 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 KCNG4Q8TDN1 519 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 C16orf70Q9BSU1 422 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 SCAND2PQ9GZW5 306 aaPredicted RBP13.7□□□□□ -0.22
DDX55-210ENST00000543016 BCAS3Q9H6U6 928 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 ERAP1Q9NZ08 941 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 CLIC4Q9Y696 253 aa13.7□□□□□ -0.22
DDX55-210ENST00000543016 H3BRB1 525 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 BACH1O14867 736 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 P4HBP07237 508 aaKnown RBP13.69□□□□□ -0.22
DDX55-210ENST00000543016 COL6A1P12109 1028 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
DDX55-210ENST00000543016 TECP42680 631 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 HAUS3Q68CZ6 603 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 CXCL17Q6UXB2 119 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 GLG1Q92896 1179 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 FAM167AQ96KS9 214 aa13.69□□□□□ -0.22
DDX55-210ENST00000543016 TUT1Q9H6E5 874 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms