RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ARHGAP25P42331 645 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 MARSP56192 900 aaKnown RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 SETQ01105 290 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 NAA30Q147X3 362 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 HERC4Q5GLZ8 1057 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 MUM1L1Q5H9M0 696 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 NIPA1Q7RTP0 329 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 SCYL3Q8IZE3 742 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 CEP63Q96MT8 703 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 MXRA8Q9BRK3 442 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 NUP58Q9BVL2 599 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 NDST4Q9H3R1 872 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 UNC45AQ9H3U1 944 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 LUC7L2Q9Y383 392 aaKnown RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 RABGAP1Q9Y3P9 1069 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 MUTP22033 750 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 FKBP3Q00688 224 aaKnown RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 BMT2Q1RMZ1 405 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 DCAF15Q66K64 600 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 SFR1Q86XK3 245 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 ACRBPQ8NEB7 543 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 SYTL5Q8TDW5 730 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 DYDC2Q96IM9 177 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 ZFP91Q96JP5 570 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 RIT2Q99578 217 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 BHMT2Q9H2M3 363 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 RAVER2Q9HCJ3 691 aaKnown RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 AGPAT5Q9NUQ2 364 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
LDB3-207ENST00000542786 UBIAD1Q9Y5Z9 338 aa15.71■□□□□ 0.11
LDB3-207ENST00000542786 RSPH10B2B2RC85 870 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 RSPH10BP0C881 870 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 ZBED6P86452 979 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 CTTNQ14247 550 aaKnown RBP15.7■□□□□ 0.1
LDB3-207ENST00000542786 EDRF1Q3B7T1 1238 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 ANGEL2Q5VTE6 544 aaKnown RBP15.7■□□□□ 0.1
LDB3-207ENST00000542786 C1orf186Q6ZWK4 172 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 APOBEC3FQ8IUX4 373 aaKnown RBP15.7■□□□□ 0.1
LDB3-207ENST00000542786 SAMD3Q8N6K7 520 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 LRRN4CLQ8ND94 238 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 REPS2Q8NFH8 660 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 WDR11Q9BZH6 1224 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 RPAP3Q9H6T3 665 aaPredicted RBP15.7■□□□□ 0.1
LDB3-207ENST00000542786 BCAS3Q9H6U6 928 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
LDB3-207ENST00000542786 DICER1Q9UPY3 1922 aaKnown RBP15.7■□□□□ 0.1
LDB3-207ENST00000542786 PES1O00541 588 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 EPHB6O15197 1021 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 DHX15O43143 795 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 GAS7O60861 476 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 SLU7O95391 586 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 PTPRAP18433 802 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 HNRNPH3P31942 346 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 USP14P54578 494 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 BACE1P56817 501 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 CDK17Q00537 523 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 EPHA7Q15375 998 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 FKBP15Q5T1M5 1219 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 RINT1Q6NUQ1 792 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 IQCDQ96DY2 449 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 ERO1AQ96HE7 468 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 TANGO6Q9C0B7 1094 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 COL4A3BPQ9Y5P4 624 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 FLOT1O75955 427 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 HIRAP54198 1017 aaPredicted RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 GNG11P61952 73 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 SPP2Q13103 211 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 PCNX4Q63HM2 1172 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 MCF2L2Q86YR7 1114 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 NELFCDQ8IXH7 590 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 WNK4Q96J92 1243 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 IRX2Q9BZI1 471 aaPredicted RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 MAP3K20Q9NYL2 800 aaKnown RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 TRAF3IP3Q9Y228 551 aa15.69■□□□□ 0.1
LDB3-207ENST00000542786 EPN1Q9Y6I3 576 aaPredicted RBP15.69■□□□□ 0.1
LDB3-207ENST00000542786 PAPPA2Q9BXP8 1791 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 IPO5O00410 1097 aaKnown RBP15.68■□□□□ 0.1
LDB3-207ENST00000542786 VWA5AO00534 786 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 ZBTB39O15060 712 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 NDUFA10O95299 355 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 ALAS1P13196 640 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 PRAMEF18Q5VWM3 479 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 KRT26Q7Z3Y9 468 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 PIGOQ8TEQ8 1089 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
LDB3-207ENST00000542786 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 OLFML3Q9NRN5 406 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 ADAMTS5Q9UNA0 930 aa15.68■□□□□ 0.1
LDB3-207ENST00000542786 TRAF5O00463 557 aa15.67■□□□□ 0.1
LDB3-207ENST00000542786 CHMP2AO43633 222 aa15.67■□□□□ 0.1
LDB3-207ENST00000542786 KIF20AO95235 890 aa15.67■□□□□ 0.1
LDB3-207ENST00000542786 ABL1P00519 1130 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms