RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 ERAP1Q9NZ08 941 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 RPS6KB1P23443 525 aa23.12■■□□□ 1.29
DDB1-220ENST00000542337 ZNF76P36508 570 aa23.12■■□□□ 1.29
DDB1-220ENST00000542337 SCN5AQ14524 2016 aa23.12■■□□□ 1.29
DDB1-220ENST00000542337 TRAF7Q6Q0C0 670 aa23.12■■□□□ 1.29
DDB1-220ENST00000542337 TNPO1Q92973 898 aaKnown RBP23.12■■□□□ 1.29
DDB1-220ENST00000542337 ANO3Q9BYT9 981 aa23.12■■□□□ 1.29
DDB1-220ENST00000542337 JPH1Q9HDC5 661 aaPredicted RBP23.12■■□□□ 1.29
DDB1-220ENST00000542337 EPB41L2O43491 1005 aaKnown RBP23.11■■□□□ 1.29
DDB1-220ENST00000542337 SCG2P13521 617 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 PFKFB3Q16875 520 aaPredicted RBP23.11■■□□□ 1.29
DDB1-220ENST00000542337 MCTP2Q6DN12 878 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 TYW1BQ6NUM6 668 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 FBXL16Q8N461 479 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 AZI2Q9H6S1 392 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 KCNH7Q9NS40 1196 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 TANC1Q9C0D5 1861 aa23.11■■□□□ 1.29
DDB1-220ENST00000542337 GSTTP1A0A1W2PQM5 241 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 GTPBP6O43824 516 aaPredicted RBP23.1■■□□□ 1.29
DDB1-220ENST00000542337 ADGRE1Q14246 886 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 CEP55Q53EZ4 464 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 RSPH3Q86UC2 560 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 SEPT8Q92599 483 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 C6orf50Q9HD87 102 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 SLC9A2Q9UBY0 812 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 TELO2Q9Y4R8 837 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 CDH23Q9H251 3354 aa23.1■■□□□ 1.29
DDB1-220ENST00000542337 TRIP12Q14669 1992 aaPredicted RBP23.09■■□□□ 1.29
DDB1-220ENST00000542337 AMHP03971 560 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 PPFIA1Q13136 1202 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 MBTPS1Q14703 1052 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 CCDC85BQ15834 202 aaPredicted RBP23.09■■□□□ 1.29
DDB1-220ENST00000542337 TAF2Q6P1X5 1199 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 DBF4BQ8NFT6 615 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 LMBR1Q8WVP7 490 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 PGBD1Q96JS3 809 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 RAD9AQ99638 391 aa23.09■■□□□ 1.29
DDB1-220ENST00000542337 TSPYL2Q9H2G4 693 aaPredicted RBP23.09■■□□□ 1.29
DDB1-220ENST00000542337 PRPF3O43395 683 aaKnown RBP23.08■■□□□ 1.29
DDB1-220ENST00000542337 CTSHP09668 335 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 MARK3P27448 753 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 SREBF1P36956 1147 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 DEFB103AP81534 67 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 TAP1Q03518 808 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 USP38Q8NB14 1042 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 ARNTL2Q8WYA1 636 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 CERS4Q9HA82 394 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 TMEM260Q9NX78 707 aa23.08■■□□□ 1.29
DDB1-220ENST00000542337 NFASCO94856 1347 aa23.08■■□□□ 1.28
DDB1-220ENST00000542337 GJB5O95377 273 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 GNA11P29992 359 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 GRIK4Q16099 956 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 PLEKHG4Q58EX7 1191 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 JAKMIP3Q5VZ66 844 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 CYP2W1Q8TAV3 490 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 SYMPKQ92797 1274 aaKnown RBP23.07■■□□□ 1.28
DDB1-220ENST00000542337 COL25A1Q9BXS0 654 aaPredicted RBP23.07■■□□□ 1.28
DDB1-220ENST00000542337 CHD9Q3L8U1 2897 aa23.07■■□□□ 1.28
DDB1-220ENST00000542337 ESYT2A0FGR8 921 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 RRN3P2A6NIE6 340 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 MEIS1O00470 390 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 RPLP2P05387 115 aaKnown RBP23.06■■□□□ 1.28
DDB1-220ENST00000542337 ARP10275 920 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 CLK2P49760 499 aaKnown RBP23.06■■□□□ 1.28
DDB1-220ENST00000542337 ADAM17P78536 824 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 RUFY3Q7L099 469 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 NIPA1Q7RTP0 329 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 MICALL1Q8N3F8 863 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 BICD2Q8TD16 824 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 AGXT2Q9BYV1 514 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 ZMYND12Q9H0C1 365 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 AGO4Q9HCK5 861 aaKnown RBP23.06■■□□□ 1.28
DDB1-220ENST00000542337 CYP46A1Q9Y6A2 500 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 UNC80Q8N2C7 3258 aa23.06■■□□□ 1.28
DDB1-220ENST00000542337 TCTN1Q2MV58 587 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 FAM26DQ5JW98 314 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 FAM117BQ6P1L5 589 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 TMCO2Q7Z6W1 182 aaPredicted RBP23.05■■□□□ 1.28
DDB1-220ENST00000542337 REXO1Q8N1G1 1221 aaKnown RBP23.05■■□□□ 1.28
DDB1-220ENST00000542337 CCDC148Q8NFR7 591 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 APBB2Q92870 758 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 TUBE1Q9UJT0 475 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 TET1Q8NFU7 2136 aa23.05■■□□□ 1.28
DDB1-220ENST00000542337 NID2Q14112 1375 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 STAT5BP51692 787 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 ACTR2P61160 394 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.04■■□□□ 1.28
DDB1-220ENST00000542337 PLPPR4Q7Z2D5 763 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 RPAINQ86UA6 219 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 PLA2G4DQ86XP0 818 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 MYOCDQ8IZQ8 938 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 PHKBQ93100 1093 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 SLC26A6Q9BXS9 759 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 RNF26Q9BY78 433 aaPredicted RBP23.04■■□□□ 1.28
DDB1-220ENST00000542337 ZSWIM6Q9HCJ5 1215 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 TRPC6Q9Y210 931 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 INSL6Q9Y581 213 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 EYSQ5T1H1 3165 aa23.04■■□□□ 1.28
DDB1-220ENST00000542337 RFXAPO00287 272 aa23.03■■□□□ 1.28
DDB1-220ENST00000542337 PDIA3P30101 505 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms