RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 AAK1Q2M2I8 961 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 TRIM50Q86XT4 487 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
VTN-203ENST00000542029 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 GLG1Q92896 1179 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 JPH1Q9HDC5 661 aaPredicted RBP13.03□□□□□ -0.32
VTN-203ENST00000542029 BARHL2Q9NY43 387 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 INSL6Q9Y581 213 aa13.03□□□□□ -0.32
VTN-203ENST00000542029 SMCO2A6NFE2 343 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 RRN3P2A6NIE6 340 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.33
VTN-203ENST00000542029 DEFB103AP81534 67 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 ARHGAP4P98171 946 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 PPFIA1Q13136 1202 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 CCDC85BQ15834 202 aaPredicted RBP13.02□□□□□ -0.33
VTN-203ENST00000542029 CEP55Q53EZ4 464 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 FAM26DQ5JW98 314 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 SKAP1Q86WV1 359 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 FBXL16Q8N461 479 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 LMBR1Q8WVP7 490 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 TCEANC2Q96MN5 208 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 ASB2Q96Q27 587 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
VTN-203ENST00000542029 SDF4Q9BRK5 362 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 ANO3Q9BYT9 981 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 AZI2Q9H6S1 392 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 KCNH7Q9NS40 1196 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 SLC9A2Q9UBY0 812 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 NAP1L2Q9ULW6 460 aaPredicted RBP13.02□□□□□ -0.33
VTN-203ENST00000542029 UNC80Q8N2C7 3258 aa13.02□□□□□ -0.33
VTN-203ENST00000542029 GSTTP1A0A1W2PQM5 241 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 STXBP3O00186 592 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 HSPA4P34932 840 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 SREBF1P36956 1147 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 AKAP17AQ02040 695 aaKnown RBP13.01□□□□□ -0.33
VTN-203ENST00000542029 NIPA1Q7RTP0 329 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 MICALL1Q8N3F8 863 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
VTN-203ENST00000542029 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
VTN-203ENST00000542029 COG5Q9UP83 839 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 NFASCO94856 1347 aa13.01□□□□□ -0.33
VTN-203ENST00000542029 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
VTN-203ENST00000542029 ESYT2A0FGR8 921 aa13□□□□□ -0.33
VTN-203ENST00000542029 MBLAC1A4D2B0 266 aaPredicted RBP13□□□□□ -0.33
VTN-203ENST00000542029 MEIS1O00470 390 aa13□□□□□ -0.33
VTN-203ENST00000542029 CTSHP09668 335 aa13□□□□□ -0.33
VTN-203ENST00000542029 SCG2P13521 617 aa13□□□□□ -0.33
VTN-203ENST00000542029 GNA11P29992 359 aa13□□□□□ -0.33
VTN-203ENST00000542029 ZNF76P36508 570 aa13□□□□□ -0.33
VTN-203ENST00000542029 SLC26A2P50443 739 aa13□□□□□ -0.33
VTN-203ENST00000542029 ERVK-21P61565 698 aa13□□□□□ -0.33
VTN-203ENST00000542029 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
VTN-203ENST00000542029 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
VTN-203ENST00000542029 GRIK4Q16099 956 aa13□□□□□ -0.33
VTN-203ENST00000542029 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
VTN-203ENST00000542029 TYW1BQ6NUM6 668 aa13□□□□□ -0.33
VTN-203ENST00000542029 FAM43BQ6ZT52 329 aaPredicted RBP13□□□□□ -0.33
VTN-203ENST00000542029 Q6ZUG5 572 aa13□□□□□ -0.33
VTN-203ENST00000542029 PLPPR4Q7Z2D5 763 aa13□□□□□ -0.33
VTN-203ENST00000542029 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
VTN-203ENST00000542029 SAMD11Q96NU1 681 aa13□□□□□ -0.33
VTN-203ENST00000542029 C6orf50Q9HD87 102 aa13□□□□□ -0.33
VTN-203ENST00000542029 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
VTN-203ENST00000542029 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
VTN-203ENST00000542029 TUBE1Q9UJT0 475 aa13□□□□□ -0.33
VTN-203ENST00000542029 PRUNE2Q8WUY3 3088 aa13□□□□□ -0.33
VTN-203ENST00000542029 MYH6P13533 1939 aa13□□□□□ -0.33
VTN-203ENST00000542029 LINC01553A4QN01 128 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 RFXAPO00287 272 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 ARHGEF15O94989 841 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 CDC27P30260 824 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
VTN-203ENST00000542029 HTRA4P83105 476 aaPredicted RBP12.99□□□□□ -0.33
VTN-203ENST00000542029 GRB10Q13322 594 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.99□□□□□ -0.334e-8■■□□□ 12
VTN-203ENST00000542029 BRF1Q92994 677 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 TOP1MTQ969P6 601 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 AGXT2Q9BYV1 514 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 IFIH1Q9BYX4 1025 aaKnown RBP12.99□□□□□ -0.33
VTN-203ENST00000542029 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 SQORQ9Y6N5 450 aa12.99□□□□□ -0.33
VTN-203ENST00000542029 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
VTN-203ENST00000542029 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
VTN-203ENST00000542029 PRPF3O43395 683 aaKnown RBP12.98□□□□□ -0.33
VTN-203ENST00000542029 CYP3A4P08684 503 aa12.98□□□□□ -0.33
VTN-203ENST00000542029 RPS6KB1P23443 525 aa12.98□□□□□ -0.33
VTN-203ENST00000542029 MARK3P27448 753 aa12.98□□□□□ -0.33
VTN-203ENST00000542029 CLK2P49760 499 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms