RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 EXOC1Q9NV70 894 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 OPA1O60313 960 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 STAT6P42226 847 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 MIIPQ5JXC2 388 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 ZNF662Q6ZS27 426 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 CCDC13Q8IYE1 715 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 KIRREL3Q8IZU9 778 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 MTMR8Q96EF0 704 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 CNOT6LQ96LI5 555 aaKnown RBP10.07□□□□□ -0.8
THBS3-211ENST00000541990 IFIH1Q9BYX4 1025 aaKnown RBP10.07□□□□□ -0.8
THBS3-211ENST00000541990 DONSONQ9NYP3 566 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 CD2APQ9Y5K6 639 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 TIAM2Q8IVF5 1701 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 IPO7O95373 1038 aaKnown RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 HPDP32754 393 aaPredicted RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 PTGISQ16647 500 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 C8orf74Q6P047 294 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 TMTC2Q8N394 836 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 CSGALNACT2Q8N6G5 542 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 OR2W6PQ8NHA6 318 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 GJA10Q969M2 543 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 TLR10Q9BXR5 811 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 FAM207AQ9NSI2 230 aaPredicted RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 RNF181Q9P0P0 153 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 PI4KBQ9UBF8 816 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 PACSIN2Q9UNF0 486 aaPredicted RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 PCDHA13Q9Y5I0 950 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 FCER1AP12319 257 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 DNM2P50570 870 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 ZBED6P86452 979 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 GUCY2DQ02846 1103 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 IKQ13123 557 aaPredicted RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 NBPF12Q5TAG4 269 aaPredicted RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 CCDC181Q5TID7 509 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 ANKRD40Q6AI12 368 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 CHADLQ6NUI6 762 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 FAM228AQ86W67 206 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 CCDC42Q96M95 316 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 CCT8L2Q96SF2 557 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 EPN3Q9H201 632 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 EPB41L5Q9HCM4 733 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 PPANQ9NQ55 473 aaKnown RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 MYH10P35580 1976 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 CNTNAP1P78357 1384 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 USP17L10C9JJH3 530 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 OPLAHO14841 1288 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 PRPF3O43395 683 aaKnown RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 PEX10O60683 326 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 PPP1R37O75864 691 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 NR1D1P20393 614 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 EEF1GP26641 437 aaKnown RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 EIF4A3P38919 411 aaKnown RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 KIF11P52732 1056 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 HIRAP54198 1017 aaPredicted RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 NLRP5P59047 1200 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.8
THBS3-211ENST00000541990 QPCTQ16769 361 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 EMBQ6PCB8 327 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 KDM7AQ6ZMT4 941 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 NLRP14Q86W24 1093 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 IQCKQ8N0W5 287 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 CAVIN3Q969G5 261 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 VCPKMTQ9H867 229 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 SLC40A1Q9NP59 571 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
THBS3-211ENST00000541990 TMEM260Q9NX78 707 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 HACL1Q9UJ83 578 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 SUGT1Q9Y2Z0 365 aa10.06□□□□□ -0.8
THBS3-211ENST00000541990 MYH6P13533 1939 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 FRMD3A2A2Y4 597 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 ATP2C2O75185 946 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 TACC1O75410 805 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 RASSF9O75901 435 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
THBS3-211ENST00000541990 USP8P40818 1118 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 GFPT1Q06210 699 aaPredicted RBP10.05□□□□□ -0.8
THBS3-211ENST00000541990 CFAP58Q5T655 872 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 ANGEL2Q5VTE6 544 aaKnown RBP10.05□□□□□ -0.8
THBS3-211ENST00000541990 IQCEQ6IPM2 695 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 CCDC70Q6NSX1 233 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 B4GALNT4Q76KP1 1039 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 ZNF572Q7Z3I7 529 aaPredicted RBP10.05□□□□□ -0.8
THBS3-211ENST00000541990 DGKHQ86XP1 1220 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 CCDC155Q8N6L0 562 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 C4orf32Q8N8J7 132 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 TRIM58Q8NG06 486 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 LRRC4CQ9HCJ2 640 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 DISC1Q9NRI5 854 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 KLC4Q9NSK0 619 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
THBS3-211ENST00000541990 MCM8Q9UJA3 840 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 HDAC9Q9UKV0 1011 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 HYOU1Q9Y4L1 999 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 E7EVH7 732 aa10.05□□□□□ -0.8
THBS3-211ENST00000541990 XBP1P17861 261 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms