RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FAM107BQ9H098 131 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 TMX2Q9Y320 296 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 FAM169AQ9Y6X4 670 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 ATAD5Q96QE3 1844 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 NDUFA10O95299 355 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 CHRM1P11229 460 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 PBX1P40424 430 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 ASIC1P78348 528 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 ZNF784Q8NCA9 323 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 NYAP2Q9P242 653 aa15.84■□□□□ 0.13
SFSWAP-210ENST00000541286 DDAH1O94760 285 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 STIM1Q13586 685 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 PFKFB3Q16875 520 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 POTEEQ6S8J3 1075 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 FAM71BQ8TC56 605 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 RMND1Q9NWS8 449 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 TMEM260Q9NX78 707 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 SUFUQ9UMX1 484 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 CSADQ9Y600 493 aa15.83■□□□□ 0.13
SFSWAP-210ENST00000541286 MYBL2P10244 700 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 TBC1D8BQ0IIM8 1120 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 SF3A3Q12874 501 aaKnown RBP eCLIP15.83■□□□□ 0.125e-7■■■■■ 31.3
SFSWAP-210ENST00000541286 UBE2SQ16763 222 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 CCDC91Q7Z6B0 441 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 OR8K1Q8NGG5 319 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 RPAP3Q9H6T3 665 aaPredicted RBP15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 ARHGEF10LQ9HCE6 1279 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 CD248Q9HCU0 757 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 CAPN7Q9Y6W3 813 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 PLIN4Q96Q06 1357 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 PSMA7O14818 248 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 ZEB2O60315 1214 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 FLOT1O75955 427 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 BMP3P12645 472 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 PDE4DQ08499 809 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 LDHDQ86WU2 507 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 ZNF280CQ8ND82 737 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 ANKS1AQ92625 1134 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 TNFRSF25Q93038 417 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 AGBL1Q96MI9 1066 aa15.83■□□□□ 0.12
SFSWAP-210ENST00000541286 SCN4AP35499 1836 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 PITPNM2Q9BZ72 1349 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 SSBP05455 408 aaKnown RBP eCLIP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 SCP2P22307 547 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 NOVP48745 357 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ATP1A2P50993 1020 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 HUNKP57058 714 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 UBXN2AP68543 259 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ENOX2Q16206 610 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 KCTD16Q68DU8 428 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 SLC30A10Q6XR72 485 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 CCDC148Q8NFR7 591 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 VCPKMTQ9H867 229 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 DISC1Q9NRI5 854 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ZNHIT6Q9NWK9 470 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ZNF112Q9UJU3 913 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 OTOFQ9HC10 1997 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ZNF185O15231 689 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ATP1A1P05023 1023 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 CYP2C8P10632 490 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 HOXA13P31271 388 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 ARHGAP25P42331 645 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 GJA10Q969M2 543 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 LIMA1Q9UHB6 759 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 PRR12Q9ULL5 1215 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 MYH6P13533 1939 aa15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-210ENST00000541286 WDR90Q96KV7 1748 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L15C9J2P7 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L13C9JLJ4 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L11C9JVI0 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L18D6R9N7 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L22D6RA61 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L17D6RBQ6 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L19D6RCP7 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L20D6RJB6 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 IDEP14735 1019 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 TECP42680 631 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 NAPAP54920 295 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L24Q0WX57 530 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 USP17L6PQ6QN14 398 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 MB21D1Q8N884 522 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 SMCR8Q8TEV9 937 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 GBA2Q9HCG7 927 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 A0A087WUV0 522 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 CCDC172P0C7W6 258 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 FCER1AP12319 257 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 CALML3P27482 149 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 NAP1L1P55209 391 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 BACE1P56817 501 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 MAP9Q49MG5 647 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 KCNV1Q6PIU1 500 aa15.81■□□□□ 0.12
SFSWAP-210ENST00000541286 DYMQ7RTS9 669 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms