RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 AFG1LQ8WV93 481 aa19.75■□□□□ 0.75
CLSTN3-210ENST00000540931 ZFP91Q96JP5 570 aaPredicted RBP19.75■□□□□ 0.75
CLSTN3-210ENST00000540931 GPR20Q99678 358 aa19.75■□□□□ 0.75
CLSTN3-210ENST00000540931 MTG1Q9BT17 334 aaPredicted RBP19.75■□□□□ 0.75
CLSTN3-210ENST00000540931 SMARCAD1Q9H4L7 1026 aa19.75■□□□□ 0.75
CLSTN3-210ENST00000540931 PHF24Q9UPV7 400 aa19.75■□□□□ 0.75
CLSTN3-210ENST00000540931 DHX15O43143 795 aaKnown RBP19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 ADCY6O43306 1168 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 SLC37A4O43826 429 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 ATG7O95352 703 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 TOB1P50616 345 aaPredicted RBP19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 ITGB3BPQ13352 177 aaPredicted RBP19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 KCNA10Q16322 511 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 ANO1Q5XXA6 986 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 ERMNQ8TAM6 284 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 NEK9Q8TD19 979 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 COPS5Q92905 334 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 MTMR9Q96QG7 549 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 PRO3102Q9H379 93 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 SAMM50Q9Y512 469 aa19.74■□□□□ 0.75
CLSTN3-210ENST00000540931 ASGR1P07306 291 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 ACLYP53396 1101 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 ACTR2P61160 394 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 PTGDRQ13258 359 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 HSDL1Q3SXM5 330 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 CCSAPQ6IQ19 270 aaPredicted RBP19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 DTHD1Q6ZMT9 781 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 PLPPR4Q7Z2D5 763 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 KCTD17Q8N5Z5 321 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 FERMT2Q96AC1 680 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 TTC12Q9H892 705 aaPredicted RBP19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 PCDHB6Q9Y5E3 794 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 MROH7Q68CQ1 1323 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 EMSYQ7Z589 1322 aa19.73■□□□□ 0.75
CLSTN3-210ENST00000540931 SLC26A4O43511 780 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 MYCNP04198 464 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 MUTP22033 750 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 TCF7P36402 384 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 ATP2C1P98194 919 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 PURAQ00577 322 aaKnown RBP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 PTPN11Q06124 597 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 GJC2Q5T442 439 aaPredicted RBP19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 C1orf53Q5VUE5 145 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 MIER3Q7Z3K6 550 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 AFAP1L1Q8TED9 768 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 HAS1Q92839 578 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 ATP6V0A1Q93050 837 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 AK8Q96MA6 479 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 STARD7Q9NQZ5 370 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 DISC1Q9NRI5 854 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 ERAP1Q9NZ08 941 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 PKD2L1Q9P0L9 805 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 FRMPD3Q5JV73 1810 aa19.72■□□□□ 0.75
CLSTN3-210ENST00000540931 CTAGE5O15320 804 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 YEATS4O95619 227 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 MYL3P08590 195 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 TXKP42681 527 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 HAUS3Q68CZ6 603 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 ABHD15Q6UXT9 468 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 GLG1Q92896 1179 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 VTI1AQ96AJ9 217 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 FAM167AQ96KS9 214 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 HTATIP2Q9BUP3 242 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 C11orf49Q9H6J7 331 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
CLSTN3-210ENST00000540931 A0A0U1RQG5 324 aaPredicted RBP19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 H3BRB1 525 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 BACH1O14867 736 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 LGR5O75473 907 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 F2P00734 622 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 SUPT20HL2P0C7V6 817 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 GNAT1P11488 350 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 DDIT3P35638 169 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 STAT5BP51692 787 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 KRT85P78386 507 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 BEX3Q00994 111 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 EPHA7Q15375 998 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 SF3A1Q15459 793 aaKnown RBP19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 NFRKBQ6P4R8 1299 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 B3GNT9Q6UX72 402 aa19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 LENG1Q96BZ8 264 aaPredicted RBP19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 SCAND2PQ9GZW5 306 aaPredicted RBP19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 TUT1Q9H6E5 874 aaKnown RBP19.7■□□□□ 0.74
CLSTN3-210ENST00000540931 IGKV6D-21A0A0A0MT36 114 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 A0A1W2PQ45 241 aaPredicted RBP19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 GSTTP1A0A1W2PQM5 241 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 A0A1W2PQY0 241 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 DDX39AO00148 427 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 LGALS2P05162 132 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 RPLP2P05387 115 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 P4HBP07237 508 aaKnown RBP19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 COL6A1P12109 1028 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 NASPP49321 788 aaPredicted RBP19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 SLC39A14Q15043 492 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 EXOC8Q8IYI6 725 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 C4orf32Q8N8J7 132 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 KCNG4Q8TDN1 519 aa19.69■□□□□ 0.74
CLSTN3-210ENST00000540931 ZNF302Q9NR11 478 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms