RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CCNT1O60563 726 aaKnown RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 ESRRAP11474 423 aaPredicted RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 GUCY1A2P33402 732 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 EIF2B2P49770 351 aaKnown RBP11.99□□□□□ -0.49
PBX1-212ENST00000540236 CCR3P51677 355 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 RASSF3Q86WH2 238 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 XAGE3Q8WTP9 111 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 IWS1Q96ST2 819 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 PRDM16Q9HAZ2 1276 aa11.99□□□□□ -0.49
PBX1-212ENST00000540236 LRRIQ1Q96JM4 1722 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 PRAMEF22A3QJZ6 481 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 SPOPO43791 374 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 TROVE2P10155 538 aaKnown RBP eCLIP11.98□□□□□ -0.49
PBX1-212ENST00000540236 ADCY8P40145 1251 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 SKOR1P84550 965 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 ARHGAP44Q17R89 818 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 DRAXINQ8NBI3 349 aaPredicted RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 FAM81BQ96LP2 452 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 MIS12Q9H081 205 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 KANSL2Q9H9L4 492 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 ADD3Q9UEY8 706 aaKnown RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 NOC2LQ9Y3T9 749 aaKnown RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 MAGEA13PA6NCF6 341 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 CTNNA2P26232 953 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 GCLCP48506 637 aaPredicted RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 TMEM139Q8IV31 216 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 UTP6Q9NYH9 597 aaKnown RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 TBX2Q13207 712 aaPredicted RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 LETM2Q2VYF4 491 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 C6orf183Q5T699 404 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 WDR60Q8WVS4 1066 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 TRAPPC3O43617 180 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 TOM1O60784 492 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 TXKP42681 527 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 IFI35P80217 286 aaPredicted RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 ETNK2Q9NVF9 386 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 ZBBXA8MT70 800 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 AGRPO00253 132 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 PGRMC1O00264 195 aaKnown RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 GPAA1O43292 621 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 HAUS5O94927 633 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 FDPSP14324 419 aaKnown RBP11.98□□□□□ -0.49
PBX1-212ENST00000540236 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 ZMYM1Q5SVZ6 1142 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 MAGEB6Q8N7X4 407 aa11.98□□□□□ -0.49
PBX1-212ENST00000540236 ENTPD5O75356 428 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 ENO1P06733 434 aaKnown RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 PTDSS1P48651 473 aaKnown RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 C14orf80Q86SX3 495 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 CUL7Q14999 1698 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 FGAP02671 866 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 VHLP40337 213 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 EPHB1P54762 984 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 AMPD3Q01432 767 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 OVGP1Q12889 678 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 RNF169Q8NCN4 708 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 LGR6Q9HBX8 967 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 CLIC5Q9NZA1 410 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 TTC37Q6PGP7 1564 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 RIBC1Q8N443 379 aaPredicted RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 GALNT4Q8N4A0 578 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 HELBQ8NG08 1087 aaPredicted RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 SLC26A7Q8TE54 656 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 C17orf50Q8WW18 174 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 CASP10Q92851 521 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 IQCDQ96DY2 449 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 UBE2OQ9C0C9 1292 aaKnown RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 CUEDC2Q9H467 287 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 CYP4F11Q9HBI6 524 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 A1CFQ9NQ94 594 aaKnown RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 ADAMTS1Q9UHI8 967 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 IZUMO2Q6UXV1 221 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 FAM228AQ86W67 206 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 FERMT2Q96AC1 680 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.97□□□□□ -0.49
PBX1-212ENST00000540236 NKX1-2Q9UD57 310 aaPredicted RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 XPOTO43592 962 aaKnown RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 GMNNO75496 209 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 TUBP50607 506 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 KDSRQ06136 332 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 KCNMA1Q12791 1236 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 ZNF658Q5TYW1 1059 aaPredicted RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 CCDC124Q96CT7 223 aaKnown RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 YIPF2Q9BWQ6 316 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 USTQ9Y2C2 406 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 ARL2BPQ9Y2Y0 163 aa11.97□□□□□ -0.49
PBX1-212ENST00000540236 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
PBX1-212ENST00000540236 H7C1D1 291 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 WDR46O15213 610 aaKnown RBP11.96□□□□□ -0.49
PBX1-212ENST00000540236 CBX6O95503 412 aa11.96□□□□□ -0.49
PBX1-212ENST00000540236 SP100P23497 879 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms