RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 LRRC10BA6NIK2 292 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 N4BP3O15049 544 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 FAM26FQ5R3K3 315 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 GUF1Q8N442 669 aaKnown RBP24.98■■□□□ 1.59
HOMER3-204ENST00000539827 PIGOQ8TEQ8 1089 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 NOC3LQ8WTT2 800 aaKnown RBP24.98■■□□□ 1.59
HOMER3-204ENST00000539827 EEF2KMTQ96G04 330 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 RIT2Q99578 217 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 TEX13BQ9BXU2 312 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 BHMT2Q9H2M3 363 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 ZHX3Q9H4I2 956 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 AGO4Q9HCK5 861 aaKnown RBP24.98■■□□□ 1.59
HOMER3-204ENST00000539827 PTPRFP10586 1907 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 ATP2A1O14983 1001 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 EYA4O95677 639 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 EPHA7Q15375 998 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 HERC4Q5GLZ8 1057 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-204ENST00000539827 CENPPQ6IPU0 288 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 B3GNT9Q6UX72 402 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 FGFBP2Q9BYJ0 223 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 TAF1DQ9H5J8 278 aaPredicted RBP24.97■■□□□ 1.59
HOMER3-204ENST00000539827 MYPNQ86TC9 1320 aa24.97■■□□□ 1.59
HOMER3-204ENST00000539827 IRF6O14896 467 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 PEX10O60683 326 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 GIT2Q14161 759 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 ANKRD13AQ8IZ07 590 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 MAGEC2Q9UBF1 373 aaPredicted RBP24.96■■□□□ 1.59
HOMER3-204ENST00000539827 PBX1P40424 430 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 ITGB3BPQ13352 177 aaPredicted RBP24.96■■□□□ 1.59
HOMER3-204ENST00000539827 MTMR1Q13613 665 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 ACAD9Q9H845 621 aa24.96■■□□□ 1.59
HOMER3-204ENST00000539827 ZBTB39O15060 712 aa24.95■■□□□ 1.58
HOMER3-204ENST00000539827 DHX15O43143 795 aaKnown RBP24.95■■□□□ 1.58
HOMER3-204ENST00000539827 PPATQ06203 517 aa24.95■■□□□ 1.58
HOMER3-204ENST00000539827 MIER3Q7Z3K6 550 aa24.95■■□□□ 1.58
HOMER3-204ENST00000539827 ERO1BQ86YB8 467 aa24.95■■□□□ 1.58
HOMER3-204ENST00000539827 RUSC1Q9BVN2 902 aa24.95■■□□□ 1.58
HOMER3-204ENST00000539827 WRAP73Q9P2S5 460 aaPredicted RBP24.95■■□□□ 1.58
HOMER3-204ENST00000539827 PCDHA2Q9Y5H9 948 aa24.95■■□□□ 1.58
HOMER3-204ENST00000539827 EEF1GP26641 437 aaKnown RBP24.94■■□□□ 1.58
HOMER3-204ENST00000539827 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-204ENST00000539827 MYOCDQ8IZQ8 938 aa24.94■■□□□ 1.58
HOMER3-204ENST00000539827 REEP2Q9BRK0 252 aa24.94■■□□□ 1.58
HOMER3-204ENST00000539827 POLD4Q9HCU8 107 aa24.94■■□□□ 1.58
HOMER3-204ENST00000539827 FRMD3A2A2Y4 597 aa24.94■■□□□ 1.58
HOMER3-204ENST00000539827 HOXA7P31268 230 aaPredicted RBP24.94■■□□□ 1.58
HOMER3-204ENST00000539827 ADKP55263 362 aaKnown RBP24.94■■□□□ 1.58
HOMER3-204ENST00000539827 BANK1Q8NDB2 785 aa24.94■■□□□ 1.58
HOMER3-204ENST00000539827 A0A0G2JLL6 359 aaPredicted RBP24.93■■□□□ 1.58
HOMER3-204ENST00000539827 TESPA1A2RU30 521 aaPredicted RBP24.93■■□□□ 1.58
HOMER3-204ENST00000539827 DNTTIP2Q5QJE6 756 aaKnown RBP24.93■■□□□ 1.58
HOMER3-204ENST00000539827 PRRT2Q7Z6L0 340 aaPredicted RBP24.93■■□□□ 1.58
HOMER3-204ENST00000539827 CNOT6LQ96LI5 555 aaKnown RBP24.93■■□□□ 1.58
HOMER3-204ENST00000539827 A1CFQ9NQ94 594 aaKnown RBP24.93■■□□□ 1.58
HOMER3-204ENST00000539827 CYP39A1Q9NYL5 469 aa24.93■■□□□ 1.58
HOMER3-204ENST00000539827 NR3C2P08235 984 aa24.93■■□□□ 1.58
HOMER3-204ENST00000539827 CCND2P30279 289 aa24.93■■□□□ 1.58
HOMER3-204ENST00000539827 KCTD17Q8N5Z5 321 aa24.93■■□□□ 1.58
HOMER3-204ENST00000539827 BTBD7Q9P203 1132 aa24.93■■□□□ 1.58
HOMER3-204ENST00000539827 SPDYE5A6NIY4 337 aa24.92■■□□□ 1.58
HOMER3-204ENST00000539827 RSPH10B2B2RC85 870 aa24.92■■□□□ 1.58
HOMER3-204ENST00000539827 RSPH10BP0C881 870 aa24.92■■□□□ 1.58
HOMER3-204ENST00000539827 CEP135Q66GS9 1140 aa24.92■■□□□ 1.58
HOMER3-204ENST00000539827 RINT1Q6NUQ1 792 aa24.92■■□□□ 1.58
HOMER3-204ENST00000539827 LXNQ9BS40 222 aa24.92■■□□□ 1.58
HOMER3-204ENST00000539827 PES1O00541 588 aaKnown RBP24.91■■□□□ 1.58
HOMER3-204ENST00000539827 ATP9AO75110 1047 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 UBXN1Q04323 297 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 LBX2Q6XYB7 198 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 VSIG10LQ86VR7 867 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 SFR1Q86XK3 245 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 FAM114A1Q8IWE2 563 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 NELFCDQ8IXH7 590 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 TC2NQ8N9U0 490 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 CPLX3Q8WVH0 158 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 NACC1Q96RE7 527 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 TSG101Q99816 390 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 BCAS3Q9H6U6 928 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 CLEC11AQ9Y240 323 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 ZC3H4Q9UPT8 1303 aaKnown RBP24.91■■□□□ 1.58
HOMER3-204ENST00000539827 IQCA1LA6NCM1 817 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 NRDCO43847 1150 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 GRIN3BO60391 1043 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 MUTP22033 750 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 RBL2Q08999 1139 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 PPFIBP1Q86W92 1011 aa24.91■■□□□ 1.58
HOMER3-204ENST00000539827 PROCA1Q8NCQ7 364 aaPredicted RBP24.91■■□□□ 1.58
HOMER3-204ENST00000539827 NSUN6Q8TEA1 469 aaKnown RBP24.91■■□□□ 1.58
HOMER3-204ENST00000539827 USP27XA6NNY8 438 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 CXCL11O14625 94 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 PRKCSHP14314 528 aaPredicted RBP24.9■■□□□ 1.58
HOMER3-204ENST00000539827 MTIF2P46199 727 aaKnown RBP24.9■■□□□ 1.58
HOMER3-204ENST00000539827 ARMC9Q7Z3E5 817 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 TUBGCP2Q9BSJ2 902 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 TMX1Q9H3N1 280 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 TBC1D22BQ9NU19 505 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 SAMM50Q9Y512 469 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 LOC285556D6RIA3 1793 aa24.9■■□□□ 1.58
HOMER3-204ENST00000539827 IRX3P78415 501 aaPredicted RBP24.89■■□□□ 1.58
HOMER3-204ENST00000539827 LRRC63Q05C16 580 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms