RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 USP46P62068 366 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SPCS2Q15005 226 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC14Q49A88 953 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FAM182BQ5T319 152 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HOOK3Q86VS8 718 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SLC43A3Q8NBI5 491 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ITPKCQ96DU7 683 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SPATA32Q96LK8 384 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RNPC3Q96LT9 517 aaKnown RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NR1H4Q96RI1 486 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LLPHQ9BRT6 129 aaKnown RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NACAP1Q9BZK3 213 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MIS12Q9H081 205 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 KANSL1LA0AUZ9 987 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF213O14771 459 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AKR1B10O60218 316 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CTDNEP1O95476 244 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CLTAP09496 248 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RHOXF2BP0C7M4 288 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RPL17P18621 184 aaKnown RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDIA3P30101 505 aaKnown RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BCAMP50895 628 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CLCN2P51788 898 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF132P52740 706 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CDK17Q00537 523 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 KLC1Q07866 573 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF362Q5T0B9 420 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FAM173BQ6P4H8 233 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MB21D2Q8IYB1 491 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ALDH16A1Q8IZ83 802 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LSMEM2Q8N112 164 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MREGQ8N565 214 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 WDR60Q8WVS4 1066 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CTNNBL1Q8WYA6 563 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF274Q96GC6 653 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CDC5LQ99459 802 aaKnown RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RHOXF2Q9BQY4 288 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SLC39A3Q9BRY0 314 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 UBAP1Q9NZ09 502 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NDUFA13Q9P0J0 144 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SUCLA2Q9P2R7 463 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NHSQ6T4R5 1651 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MROH7Q68CQ1 1323 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BICDL2A1A5D9 508 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GMNCA6NCL1 334 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SSBP05455 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ATP2A2P16615 1042 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 S100A1P23297 94 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FANCCQ00597 558 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDE1BQ01064 536 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CYP4A11Q02928 519 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ITIH4Q14624 930 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SF3B3Q15393 1217 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ATL3Q6DD88 541 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HIBCHQ6NVY1 386 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 EMBQ6PCB8 327 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TRAPPC11Q7Z392 1133 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 KCTD17Q8N5Z5 321 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC63Q8NA47 563 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NCOA7Q8NI08 942 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DQX1Q8TE96 717 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SEC16BQ96JE7 1060 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CATSPER2Q96P56 530 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RPAP3Q9H6T3 665 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MRPL44Q9H9J2 332 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NCOA5Q9HCD5 579 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PANK4Q9NVE7 773 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZMAT5Q9UDW3 170 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SSX2IPQ9Y2D8 614 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CARD8Q9Y2G2 431 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BTAF1O14981 1849 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MYO5AQ9Y4I1 1855 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 A0A0J9YVX5 310 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GOLGA6L10A0A0M3HER8 536 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PTPDC1A2A3K4 754 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LSM1O15116 133 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CYTH3O43739 400 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RPS6KA4O75676 772 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ASLP04424 464 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDE6BP35913 854 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ANTXR2P58335 489 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TAF11Q15544 211 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SKIDA1Q1XH10 827 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TOGARAM2Q6ZUX3 1019 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF365Q70YC5 407 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RASGRP2Q7LDG7 609 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MAGEB6Q8N7X4 407 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TC2NQ8N9U0 490 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF280CQ8ND82 737 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DIS3LQ8TF46 1054 aaKnown RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AIDAQ96BJ3 306 aa6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NAPGQ99747 312 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RTFDC1Q9BY42 306 aaPredicted RBP6.28□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC68Q9H2F9 335 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms