RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 PPP1R13BQ96KQ4 1090 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 BHMT2Q9H2M3 363 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 UNC45AQ9H3U1 944 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 RNF146Q9NTX7 359 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 ADAMTS5Q9UNA0 930 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 PCDHA2Q9Y5H9 948 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 UBIAD1Q9Y5Z9 338 aa22.66■■□□□ 1.22
DDX55-205ENST00000538744 PES1O00541 588 aaKnown RBP22.65■■□□□ 1.22
DDX55-205ENST00000538744 SLITRK3O94933 977 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 CASP14P31944 242 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 CACNB1Q02641 598 aaPredicted RBP22.65■■□□□ 1.22
DDX55-205ENST00000538744 RAD51AP2Q09MP3 1159 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 CTTNQ14247 550 aaKnown RBP22.65■■□□□ 1.22
DDX55-205ENST00000538744 EPHA7Q15375 998 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 TKFCQ3LXA3 575 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 CEP135Q66GS9 1140 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 B3GNT9Q6UX72 402 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 SLC30A10Q6XR72 485 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 CATSPERGQ6ZRH7 1159 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 SULF1Q8IWU6 871 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 CPLX3Q8WVH0 158 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 TAAR1Q96RJ0 339 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 NAA15Q9BXJ9 866 aaKnown RBP22.65■■□□□ 1.22
DDX55-205ENST00000538744 KIF2AO00139 706 aaPredicted RBP22.65■■□□□ 1.22
DDX55-205ENST00000538744 TPH2Q8IWU9 490 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 RBM46Q8TBY0 533 aaKnown RBP22.65■■□□□ 1.22
DDX55-205ENST00000538744 REEP2Q9BRK0 252 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 KCNH7Q9NS40 1196 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 TBC1D7Q9P0N9 293 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 MYPNQ86TC9 1320 aa22.65■■□□□ 1.22
DDX55-205ENST00000538744 PTPRFP10586 1907 aa22.64■■□□□ 1.22
DDX55-205ENST00000538744 YBX3P16989 372 aaKnown RBP eCLIP22.64■■□□□ 1.21
DDX55-205ENST00000538744 MAP3K9P80192 1104 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 PGM5Q15124 567 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 SH3D19Q5HYK7 790 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 C9orf131Q5VYM1 1079 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 SNRNP48Q6IEG0 339 aaKnown RBP22.64■■□□□ 1.21
DDX55-205ENST00000538744 NSMFQ6X4W1 530 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 NEK9Q8TD19 979 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 EEF2KMTQ96G04 330 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 ZHX3Q9H4I2 956 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 JADE2Q9NQC1 790 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 SNCAIPQ9Y6H5 919 aa22.64■■□□□ 1.21
DDX55-205ENST00000538744 EIF2AK2P19525 551 aaKnown RBP22.63■■□□□ 1.21
DDX55-205ENST00000538744 FXR1P51114 621 aaKnown RBP eCLIP22.63■■□□□ 1.21
DDX55-205ENST00000538744 MRPS9P82933 396 aaKnown RBP22.63■■□□□ 1.21
DDX55-205ENST00000538744 VGLL4Q14135 290 aa22.63■■□□□ 1.21
DDX55-205ENST00000538744 ZCWPW2Q504Y3 356 aa22.63■■□□□ 1.21
DDX55-205ENST00000538744 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.63■■□□□ 1.21
DDX55-205ENST00000538744 RMDN3Q96TC7 470 aa22.63■■□□□ 1.21
DDX55-205ENST00000538744 NOC4LQ9BVI4 516 aaKnown RBP22.63■■□□□ 1.21
DDX55-205ENST00000538744 RIPK3Q9Y572 518 aa22.63■■□□□ 1.21
DDX55-205ENST00000538744 B4DLN1 442 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 ADM5C9JUS6 153 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 ATP2A1O14983 1001 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 ZSCAN12O43309 604 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 LRRC55Q6ZSA7 311 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 NACC1Q96RE7 527 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 RUSC1Q9BVN2 902 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 FGFBP2Q9BYJ0 223 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 AGO4Q9HCK5 861 aaKnown RBP22.62■■□□□ 1.21
DDX55-205ENST00000538744 PXMP2Q9NR77 195 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 ZNF214Q9UL59 606 aaPredicted RBP22.62■■□□□ 1.21
DDX55-205ENST00000538744 LOC285556D6RIA3 1793 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 PPP1R12BO60237 982 aaPredicted RBP22.62■■□□□ 1.21
DDX55-205ENST00000538744 TBCAO75347 108 aaKnown RBP22.62■■□□□ 1.21
DDX55-205ENST00000538744 MTMR1Q13613 665 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 PIGOQ8TEQ8 1089 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 PDCD2LQ9BRP1 358 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 HOXC10Q9NYD6 342 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 CSADQ9Y600 493 aa22.62■■□□□ 1.21
DDX55-205ENST00000538744 FKBP3Q00688 224 aaKnown RBP22.61■■□□□ 1.21
DDX55-205ENST00000538744 BAATQ14032 418 aaPredicted RBP22.61■■□□□ 1.21
DDX55-205ENST00000538744 MIIPQ5JXC2 388 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 ARHGEF16Q5VV41 709 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 RINT1Q6NUQ1 792 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 XRRA1Q6P2D8 792 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 MIER3Q7Z3K6 550 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 SFR1Q86XK3 245 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 MYRIPQ8NFW9 859 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 SCFD1Q8WVM8 642 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 TEX13BQ9BXU2 312 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 PAXBP1Q9Y5B6 917 aa22.61■■□□□ 1.21
DDX55-205ENST00000538744 UQCRHLA0A096LP55 91 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 DDX39AO00148 427 aaKnown RBP22.6■■□□□ 1.21
DDX55-205ENST00000538744 UQCRHP07919 91 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 MYCLP12524 364 aaPredicted RBP22.6■■□□□ 1.21
DDX55-205ENST00000538744 GAP43P17677 238 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 FECHP22830 423 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 TBC1D8BQ0IIM8 1120 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 TMEM132BQ14DG7 1078 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 FKBP15Q5T1M5 1219 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 CEP63Q96MT8 703 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 TBC1D22BQ9NU19 505 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 PKD2L1Q9P0L9 805 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 PPP2R2CQ9Y2T4 447 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 COL4A3BPQ9Y5P4 624 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 DHX15O43143 795 aaKnown RBP22.6■■□□□ 1.21
DDX55-205ENST00000538744 TUBB4AP04350 444 aa22.6■■□□□ 1.21
DDX55-205ENST00000538744 MAN2A1Q16706 1144 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms