RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 C4AP0C0L4 1744 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 AFDNP55196 1824 aaKnown RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 CASP8AP2Q9UKL3 1982 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 CNOT1A5YKK6 2376 aaKnown RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 HNRNPDLO14979 420 aaKnown RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 NEDD9Q14511 834 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 LMBRD2Q68DH5 695 aaPredicted RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 TMCO2Q7Z6W1 182 aaPredicted RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 ARRDC4Q8NCT1 418 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 HASPINQ8TF76 798 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 U2AF1L4Q8WU68 220 aaKnown RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 TRIB2Q92519 343 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 MS4A4AQ96JQ5 239 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 FAM193BQ96PV7 902 aaPredicted RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 OSMRQ99650 979 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 KCNH3Q9ULD8 1083 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 NUB1Q9Y5A7 615 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 K7ENM7 598 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 TBC1D12O60347 775 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 AKR1A1P14550 325 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 ZSCAN20P17040 1043 aaPredicted RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 GLRA4Q5JXX5 417 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 FAM160B1Q5W0V3 765 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 HAUS3Q68CZ6 603 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 SEPT1Q8WYJ6 367 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 TRPV6Q9H1D0 765 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 PXMP2Q9NR77 195 aa8.06□□□□□ -1.12
MSH6-209ENST00000538136 MAGEC2Q9UBF1 373 aaPredicted RBP8.06□□□□□ -1.12
MSH6-209ENST00000538136 FAM86B1E9PN63 330 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 STK25O00506 426 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 ASGR1P07306 291 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 FAM86B2P0C5J1 330 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 BCAR1P56945 870 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 ACTR2P61160 394 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 CACNB2Q08289 660 aaPredicted RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 STRN3Q13033 797 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 STIM1Q13586 685 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 KCNA10Q16322 511 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 OTUD6AQ7L8S5 288 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 ANKRD23Q86SG2 305 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 SMARCE1Q969G3 411 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 ELMO3Q96BJ8 720 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 ZSCAN16Q9H4T2 348 aaPredicted RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 TRMT13Q9NUP7 481 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 SLC16A4O15374 487 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 STRNO43815 780 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 EIF3JO75822 258 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 SSR1P43307 286 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 PNOCQ13519 176 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 CCDC85BQ15834 202 aaPredicted RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 FAM178BQ8IXR5 827 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 MRPS27Q92552 414 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 TRIM44Q96DX7 344 aaPredicted RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 PIN4Q9Y237 131 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 PKD1L3Q7Z443 1732 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 PSAPP07602 524 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 CYP2C18P33260 490 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 DDIT3P35638 169 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 MTIF2P46199 727 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 TPM4P67936 248 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 TKFCQ3LXA3 575 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 IQUBQ8NA54 791 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 DIS3LQ8TF46 1054 aaKnown RBP8.05□□□□□ -1.12
MSH6-209ENST00000538136 KIF2CQ99661 725 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 CRACR2AQ9BSW2 395 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 SPZ1Q9BXG8 430 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 TRIM5Q9C035 493 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 LAMA3Q16787 3333 aa8.05□□□□□ -1.12
MSH6-209ENST00000538136 TNNI1P19237 187 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 SMTNP53814 917 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 TLE2Q04725 743 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 DGKDQ16760 1214 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 RSPH3Q86UC2 560 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 MAML3Q96JK9 1138 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 GLT8D2Q9H1C3 349 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 TELO2Q9Y4R8 837 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 PCDHA10Q9Y5I2 948 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 CACNA1SQ13698 1873 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 POLR2AP24928 1970 aaKnown RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 WDR64B1ANS9 1081 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 HMGCRP04035 888 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 INSRRP14616 1297 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 PLCG1P19174 1290 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 KLRC1P26715 233 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 PGM5Q15124 567 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 CT47A1Q5JQC4 288 aaPredicted RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 RIOX2Q8IUF8 465 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 SHCBP1Q8NEM2 672 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 ANKRD20A12PQ8NF67 263 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 LEO1Q8WVC0 666 aaPredicted RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 CDHR1Q96JP9 859 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 MMS19Q96T76 1030 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 APBA2Q99767 749 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 RTN4Q9NQC3 1192 aaKnown RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 PDS5AQ29RF7 1337 aaKnown RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 LAMA2P24043 3122 aaKnown RBP8.04□□□□□ -1.12
MSH6-209ENST00000538136 SOWAHBA6NEL2 793 aa8.04□□□□□ -1.12
MSH6-209ENST00000538136 TPM2P07951 284 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms