RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 PLCG2P16885 1265 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 MDH1P40925 334 aaKnown RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 TXKP42681 527 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 ATP1A2P50993 1020 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 CUL1Q13616 776 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 FAM83BQ5T0W9 1011 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 KCNV1Q6PIU1 500 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 USP38Q8NB14 1042 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 SNX29Q8TEQ0 813 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 TAF4BQ92750 862 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 PBKQ96KB5 322 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 CABS1Q96KC9 395 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 CRAMP1Q96RY5 1269 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 MYCBPQ99417 103 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 KRT12Q99456 494 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 TMBIM4Q9HC24 238 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 AIPL1Q9NZN9 384 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 FAM153AQ9UHL3 310 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 TMEM59LQ9UK28 342 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 STX8Q9UNK0 236 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 ANKRD31Q8N7Z5 1873 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 TLR2O60603 784 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 NOL4O94818 638 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 BTDP43251 543 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 IFI16Q16666 785 aaKnown RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 SLC4A8Q2Y0W8 1093 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 TTC19Q6DKK2 380 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 DYMQ7RTS9 669 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 TMC4Q7Z404 712 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 NLRP14Q86W24 1093 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 ZC3H3Q8IXZ2 948 aaKnown RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 IFT81Q8WYA0 676 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 DDX12PQ92771 950 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 A1CFQ9NQ94 594 aaKnown RBP13.35□□□□□ -0.27
CPSF7-218ENST00000537641 QSER1Q2KHR3 1735 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 MYH4Q9Y623 1939 aa13.35□□□□□ -0.27
CPSF7-218ENST00000537641 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-218ENST00000537641 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 FAM107AO95990 144 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 KLRC1P26715 233 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 ANXA13P27216 316 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 DDR1Q08345 913 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 COASYQ13057 564 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 ITGB3BPQ13352 177 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-218ENST00000537641 ASIC2Q16515 512 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 KCTD16Q68DU8 428 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 PPP1R18Q6NYC8 613 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 MAPKAPK5Q8IW41 473 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 TRIM59Q8IWR1 403 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 FAM163AQ96GL9 167 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-218ENST00000537641 RABEP2Q9H5N1 569 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 NRXN2Q9P2S2 1712 aa13.34□□□□□ -0.27
CPSF7-218ENST00000537641 RAD51CO43502 376 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 FTCDO95954 541 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 GOLGA8HP0CJ92 632 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 NOVP48745 357 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 BIRC3Q13489 604 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 FAM26FQ5R3K3 315 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 HYIQ5T013 277 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 TEX11Q8IYF3 940 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 TBC1D16Q8TBP0 767 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 TBC1D5Q92609 795 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 GANQ9H2C0 597 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 RIOX1Q9H6W3 641 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 PLAAQ9Y263 795 aa13.33□□□□□ -0.27
CPSF7-218ENST00000537641 GAKO14976 1311 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 ZSCAN5CA6NGD5 496 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 H0YHG0 523 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 POLRMTO00411 1230 aaKnown RBP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 TRAF5O00463 557 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 KIF4AO95239 1232 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 USP11P51784 963 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 ADCY7P51828 1080 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 GUCY2FP51841 1108 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 MNAT1P51948 309 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 POLR2FP61218 127 aaKnown RBP13.33□□□□□ -0.28
CPSF7-218ENST00000537641 KLHL30Q0D2K2 578 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 MTMR3Q13615 1198 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 RAPGEF1Q13905 1077 aa13.33□□□□□ -0.28
CPSF7-218ENST00000537641 RPS6KA1Q15418 735 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms