RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PPP2R5CQ13362 524 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
MKS1-204ENST00000537529 CEP112Q8N8E3 955 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 EHBP1Q8NDI1 1231 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 NEK11Q8NG66 645 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 GOLGA1Q92805 767 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 ZNF341Q9BYN7 854 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 GLIS2Q9BZE0 524 aaPredicted RBP17.32■□□□□ 0.36
MKS1-204ENST00000537529 EML1O00423 815 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 PSMD10O75832 226 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 RASA3Q14644 834 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 SFR1Q86XK3 245 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 FBXO28Q9NVF7 368 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 GUCA1BQ9UMX6 200 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 PLAGL2Q9UPG8 496 aa17.32■□□□□ 0.36
MKS1-204ENST00000537529 KRT86O43790 486 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 GAS7O60861 476 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 ABL1P00519 1130 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 ICAM1P05362 532 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 RPS12P25398 132 aaKnown RBP17.31■□□□□ 0.36
MKS1-204ENST00000537529 PTGER2P43116 358 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
MKS1-204ENST00000537529 CEP55Q53EZ4 464 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 CCDC122Q5T0U0 273 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 RSRC2Q7L4I2 434 aaKnown RBP17.31■□□□□ 0.36
MKS1-204ENST00000537529 OTOP1Q7RTM1 612 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 JAKMIP2Q96AA8 810 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 DEFB129Q9H1M3 183 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 GINM1Q9NU53 330 aa17.31■□□□□ 0.36
MKS1-204ENST00000537529 CETN3O15182 167 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 WDR46O15213 610 aaKnown RBP17.3■□□□□ 0.36
MKS1-204ENST00000537529 GAP43P17677 238 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 MUTP22033 750 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 PRELPP51888 382 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 TEX35Q5T0J7 233 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 SRGAP1Q7Z6B7 1085 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 TRIM59Q8IWR1 403 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 GPR161Q8N6U8 529 aaKnown RBP17.3■□□□□ 0.36
MKS1-204ENST00000537529 LPAR1Q92633 364 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 CCDC42Q96M95 316 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 RGL1Q9NZL6 768 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 OGFRQ9NZT2 677 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 FAM184BQ9ULE4 1060 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 CCPG1Q9ULG6 757 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.3■□□□□ 0.36
MKS1-204ENST00000537529 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 EPHB6O15197 1021 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 POLD1P28340 1107 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 ADAM9Q13443 819 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 SPA17Q15506 151 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 EPM2AIP1Q7L775 607 aaPredicted RBP17.3■□□□□ 0.36
MKS1-204ENST00000537529 RABGGTAQ92696 567 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 HSD17B14Q9BPX1 270 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 RUSC1Q9BVN2 902 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 TSGA10Q9BZW7 698 aa17.3■□□□□ 0.36
MKS1-204ENST00000537529 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
MKS1-204ENST00000537529 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 CHMP2AO43633 222 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 CALUO43852 315 aaPredicted RBP17.29■□□□□ 0.36
MKS1-204ENST00000537529 HSD17B4P51659 736 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 CHMP4BP1P59074 171 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 UBXN2AP68543 259 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 WHAMMP3Q1A5X7 153 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 KNOP1Q1ED39 458 aaKnown RBP17.29■□□□□ 0.36
MKS1-204ENST00000537529 CACNA2D4Q7Z3S7 1137 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 DYDC2Q96IM9 177 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 ZNF577Q9BSK1 485 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 TRIM10Q9UDY6 481 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
MKS1-204ENST00000537529 INPP5BP32019 993 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 CASP5P51878 434 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 TUBB4BP68371 445 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 CTTNQ14247 550 aaKnown RBP17.28■□□□□ 0.36
MKS1-204ENST00000537529 BMT2Q1RMZ1 405 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 PDXDC1Q6P996 788 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 RRAGAQ7L523 313 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 TPH2Q8IWU9 490 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
MKS1-204ENST00000537529 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
MKS1-204ENST00000537529 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 KIAA1683Q9H0B3 1180 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 NUCKS1Q9H1E3 243 aaKnown RBP17.28■□□□□ 0.36
MKS1-204ENST00000537529 CEP72Q9P209 647 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 LRRC53A6NM62 1247 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 PDXKO00764 312 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 ERCC3P19447 782 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 NR2F2P24468 414 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 CLCN6P51797 869 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 VAV2P52735 878 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 MCF2L2Q86YR7 1114 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 BAP1Q92560 729 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 TEPSINQ96N21 525 aa17.28■□□□□ 0.36
MKS1-204ENST00000537529 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
MKS1-204ENST00000537529 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms