RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 STAT3P40763 770 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 GIT2Q14161 759 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 EPHA7Q15375 998 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 BMT2Q1RMZ1 405 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 POTEGQ6S5H5 508 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 POTEEQ6S8J3 1075 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 HPS3Q969F9 1004 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 EIF3CQ99613 913 aaKnown RBP15.01□□□□□ -0.01
SMG6-203ENST00000536871 TEKT3Q9BXF9 490 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 AS3MTQ9HBK9 375 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 ARGLU1Q9NWB6 273 aaPredicted RBP15.01□□□□□ -0.01
SMG6-203ENST00000536871 CCPG1Q9ULG6 757 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 PLAGL2Q9UPG8 496 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 MRFAP1Q9Y605 127 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 EIF3DO15371 548 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMG6-203ENST00000536871 KRT86O43790 486 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 CEP112Q8N8E3 955 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 NEK11Q8NG66 645 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 SYN2Q92777 582 aaPredicted RBP15.01□□□□□ -0.01
SMG6-203ENST00000536871 METTL14Q9HCE5 456 aaKnown RBP15.01□□□□□ -0.01
SMG6-203ENST00000536871 LZTFL1Q9NQ48 299 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 SIK3Q9Y2K2 1263 aa15.01□□□□□ -0.01
SMG6-203ENST00000536871 KNOP1Q1ED39 458 aaKnown RBP15□□□□□ -0.01
SMG6-203ENST00000536871 ARSHQ5FYA8 562 aa15□□□□□ -0.01
SMG6-203ENST00000536871 FRMD5Q7Z6J6 570 aa15□□□□□ -0.01
SMG6-203ENST00000536871 SCFD1Q8WVM8 642 aa15□□□□□ -0.01
SMG6-203ENST00000536871 TSC1Q92574 1164 aa15□□□□□ -0.01
SMG6-203ENST00000536871 GJA10Q969M2 543 aa15□□□□□ -0.01
SMG6-203ENST00000536871 TEPSINQ96N21 525 aa15□□□□□ -0.01
SMG6-203ENST00000536871 WDR24Q96S15 920 aa15□□□□□ -0.01
SMG6-203ENST00000536871 MXRA8Q9BRK3 442 aa15□□□□□ -0.01
SMG6-203ENST00000536871 KCTD10Q9H3F6 313 aa15□□□□□ -0.01
SMG6-203ENST00000536871 ODF2LQ9ULJ1 636 aa15□□□□□ -0.01
SMG6-203ENST00000536871 CTDP1Q9Y5B0 961 aaPredicted RBP15□□□□□ -0.01
SMG6-203ENST00000536871 FER1L6Q2WGJ9 1857 aa15□□□□□ -0.01
SMG6-203ENST00000536871 RPTORQ8N122 1335 aa15□□□□□ -0.01
SMG6-203ENST00000536871 NFKBIEO00221 500 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 PABPC4Q13310 644 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMG6-203ENST00000536871 SPA17Q15506 151 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 NFIL3Q16649 462 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 XRRA1Q6P2D8 792 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 EPM2AIP1Q7L775 607 aaPredicted RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 APOBEC3FQ8IUX4 373 aaKnown RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 FBXO41Q8TF61 875 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 NAPGQ99747 312 aaPredicted RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 ZNF577Q9BSK1 485 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 WDR18Q9BV38 432 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 LUC7LQ9NQ29 371 aaKnown RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMG6-203ENST00000536871 RNF225M0QZC1 329 aaPredicted RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 FZD9O00144 591 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 SLC16A3O15427 465 aaKnown RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 ZBED4O75132 1171 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 ADAM9Q13443 819 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 LRRC41Q15345 812 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 ZNF569Q5MCW4 686 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 WDR59Q6PJI9 974 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 TRIM59Q8IWR1 403 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 CCDC42Q96M95 316 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 REEP2Q9BRK0 252 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 TANGO6Q9C0B7 1094 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 BHMT2Q9H2M3 363 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
SMG6-203ENST00000536871 CDC23Q9UJX2 597 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 PPP2R3BQ9Y5P8 575 aa14.99□□□□□ -0.01
SMG6-203ENST00000536871 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 USO1O60763 962 aaKnown RBP14.98□□□□□ -0.01
SMG6-203ENST00000536871 TADA3O75528 432 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 TUBBP07437 444 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
SMG6-203ENST00000536871 WHAMMP3Q1A5X7 153 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 ACRBPQ8NEB7 543 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 CHP1Q99653 195 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 MMRN2Q9H8L6 949 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 NHEJ1Q9H9Q4 299 aaPredicted RBP14.98□□□□□ -0.01
SMG6-203ENST00000536871 SLC38A10Q9HBR0 1119 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 AGPAT5Q9NUQ2 364 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 CEP72Q9P209 647 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 FRMPD4Q14CM0 1322 aa14.98□□□□□ -0.01
SMG6-203ENST00000536871 SSU72P8A0A1W2PR75 194 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 IPO5O00410 1097 aaKnown RBP14.97□□□□□ -0.01
SMG6-203ENST00000536871 PPP1R12BO60237 982 aaPredicted RBP14.97□□□□□ -0.01
SMG6-203ENST00000536871 SLITRK3O94933 977 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 FAM13AO94988 1023 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ARHGAP25P42331 645 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 EPS15P42566 896 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ALCAMQ13740 583 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 PCNX4Q63HM2 1172 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 RINT1Q6NUQ1 792 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 B3GNT9Q6UX72 402 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 CACNA2D4Q7Z3S7 1137 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 KIAA1328Q86T90 577 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 MICALL2Q8IY33 904 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 GPR161Q8N6U8 529 aaKnown RBP14.97□□□□□ -0.01
SMG6-203ENST00000536871 GOLGA5Q8TBA6 731 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ZHX3Q9H4I2 956 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 TBC1D22BQ9NU19 505 aa14.97□□□□□ -0.01
SMG6-203ENST00000536871 ZHX1Q9UKY1 873 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms