RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 TRIML1Q8N9V2 468 aa23.66■■□□□ 1.38
TRIM3-214ENST00000536344 TRPM4Q8TD43 1214 aa23.66■■□□□ 1.38
TRIM3-214ENST00000536344 SELENOOQ9BVL4 669 aa23.66■■□□□ 1.38
TRIM3-214ENST00000536344 SYNRGQ9UMZ2 1314 aa23.66■■□□□ 1.38
TRIM3-214ENST00000536344 GNGT1P63211 74 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 SNX29Q8TEQ0 813 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 PHF20L1A8MW92 1017 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 PBX1P40424 430 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 FKBP15Q5T1M5 1219 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 ANGEL2Q5VTE6 544 aaKnown RBP23.65■■□□□ 1.38
TRIM3-214ENST00000536344 ZKSCAN4Q969J2 545 aaPredicted RBP23.65■■□□□ 1.38
TRIM3-214ENST00000536344 CRACR2AQ9BSW2 395 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 VCPKMTQ9H867 229 aa23.65■■□□□ 1.38
TRIM3-214ENST00000536344 ADD3Q9UEY8 706 aaKnown RBP23.65■■□□□ 1.38
TRIM3-214ENST00000536344 ATP1A1P05023 1023 aaKnown RBP23.64■■□□□ 1.38
TRIM3-214ENST00000536344 PRCPP42785 496 aa23.64■■□□□ 1.38
TRIM3-214ENST00000536344 GRB10Q13322 594 aa23.64■■□□□ 1.38
TRIM3-214ENST00000536344 FKBP1CQ5VVH2 108 aa23.64■■□□□ 1.38
TRIM3-214ENST00000536344 CHP1Q99653 195 aa23.64■■□□□ 1.38
TRIM3-214ENST00000536344 DACH1Q9UI36 760 aa23.64■■□□□ 1.38
TRIM3-214ENST00000536344 KCNG1Q9UIX4 513 aa23.64■■□□□ 1.38
TRIM3-214ENST00000536344 ZNF280AP59817 542 aaPredicted RBP23.64■■□□□ 1.37
TRIM3-214ENST00000536344 CPXCR1Q8N123 301 aa23.64■■□□□ 1.37
TRIM3-214ENST00000536344 CAPS2Q9BXY5 557 aa23.64■■□□□ 1.37
TRIM3-214ENST00000536344 SPDYE3A6NKU9 549 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 FZD9O00144 591 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 ARHGAP4P98171 946 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 CDK5RAP3Q96JB5 506 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 PNMA5Q96PV4 448 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 NAA15Q9BXJ9 866 aaKnown RBP23.63■■□□□ 1.37
TRIM3-214ENST00000536344 HOMER2Q9NSB8 354 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 PCDHA12Q9UN75 941 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 COL2A1P02458 1487 aaPredicted RBP23.63■■□□□ 1.37
TRIM3-214ENST00000536344 ZNF185O15231 689 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 SSBP05455 408 aaKnown RBP eCLIP23.63■■□□□ 1.37
TRIM3-214ENST00000536344 ASIC1P78348 528 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 TUBB2AQ13885 445 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 TMEM266Q2M3C6 531 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 TUBB2BQ9BVA1 445 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 KBTBD4Q9NVX7 518 aa23.63■■□□□ 1.37
TRIM3-214ENST00000536344 ASNSP08243 561 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 FCER1AP12319 257 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 CNPY4Q8N129 248 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 CALML4Q96GE6 196 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 AGBL1Q96MI9 1066 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 FAM107BQ9H098 131 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 FAM86B1E9PN63 330 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 ECM2O94769 699 aaPredicted RBP23.62■■□□□ 1.37
TRIM3-214ENST00000536344 FAM86B2P0C5J1 330 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 EPS15P42566 896 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 PMS1P54277 932 aaKnown RBP23.62■■□□□ 1.37
TRIM3-214ENST00000536344 AK8Q96MA6 479 aa23.62■■□□□ 1.37
TRIM3-214ENST00000536344 REXO2Q9Y3B8 237 aaKnown RBP23.62■■□□□ 1.37
TRIM3-214ENST00000536344 KLRC4O43908 158 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 TRAPPC11Q7Z392 1133 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 PRPF38AQ8NAV1 312 aaKnown RBP23.61■■□□□ 1.37
TRIM3-214ENST00000536344 NELFBQ8WX92 580 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 EIF3HO15372 352 aaKnown RBP eCLIP23.61■■□□□ 1.37
TRIM3-214ENST00000536344 TBC1D12O60347 775 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 TUBB4BP68371 445 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 PPP4R3AQ6IN85 833 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 BTNL9Q6UXG8 535 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 BLOC1S4Q9NUP1 217 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 GOLGA6BA6NDN3 693 aa23.61■■□□□ 1.37
TRIM3-214ENST00000536344 FNTAP49354 379 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 CACNB1Q02641 598 aaPredicted RBP23.6■■□□□ 1.37
TRIM3-214ENST00000536344 MTMR2Q13614 643 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 TRIM9Q9C026 710 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 FHDC1Q9C0D6 1143 aaPredicted RBP23.6■■□□□ 1.37
TRIM3-214ENST00000536344 H0YHG0 523 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 PDE2AO00408 941 aaPredicted RBP23.6■■□□□ 1.37
TRIM3-214ENST00000536344 ZNF658Q5TYW1 1059 aaPredicted RBP23.6■■□□□ 1.37
TRIM3-214ENST00000536344 KRT79Q5XKE5 535 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 PYM1Q9BRP8 204 aaKnown RBP23.6■■□□□ 1.37
TRIM3-214ENST00000536344 TANGO6Q9C0B7 1094 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 ABHD10Q9NUJ1 306 aa23.6■■□□□ 1.37
TRIM3-214ENST00000536344 IDEP14735 1019 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 ERCC5P28715 1186 aaPredicted RBP23.59■■□□□ 1.37
TRIM3-214ENST00000536344 FXR2P51116 673 aaKnown RBP eCLIP23.59■■□□□ 1.37
TRIM3-214ENST00000536344 PDE4DQ08499 809 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 STK4Q13043 487 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 PDCLQ13371 301 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 TNFAIP1Q13829 316 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 GBP6Q6ZN66 633 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 TUBBP07437 444 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 ZNF76P36508 570 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 PPARDQ03181 441 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 PPFIA1Q13136 1202 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 SPATA1Q5VX52 437 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 HDAC7Q8WUI4 952 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 VPS16Q9H269 839 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 SLC39A2Q9NP94 309 aa23.59■■□□□ 1.37
TRIM3-214ENST00000536344 POTEB3A0JP26 581 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 MYMKA6NI61 221 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 POTECB2RU33 542 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 MEIS1O00470 390 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 RPS12P25398 132 aaKnown RBP23.58■■□□□ 1.37
TRIM3-214ENST00000536344 SPP2Q13103 211 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 MAP9Q49MG5 647 aa23.58■■□□□ 1.37
TRIM3-214ENST00000536344 POTEBQ6S5H4 581 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms