RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ERLIN1O75477 346 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 RHOBTB3O94955 611 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 BCRP11274 1271 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 VEGFAP15692 232 aaPredicted RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 VAMP1P23763 118 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 EEF1GP26641 437 aaKnown RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 MCM7P33993 719 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 KRT9P35527 623 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 PRPHP41219 470 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 PPP1R2P41236 205 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 PRCPP42785 496 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 MECOMQ03112 1051 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 MEA1Q16626 185 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 KIF4BQ2VIQ3 1234 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 COBLL1Q53SF7 1204 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 TTI2Q6NXR4 508 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 WDR93Q6P2C0 686 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 HDXQ7Z353 690 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 TRAPPC11Q7Z392 1133 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 KDF1Q8NAX2 398 aaPredicted RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 ACRBPQ8NEB7 543 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 OR8K1Q8NGG5 319 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 CPLX3Q8WVH0 158 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 DHTKD1Q96HY7 919 aaPredicted RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 INSM2Q96T92 566 aaPredicted RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 DNAJC7Q99615 494 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 GBP3Q9H0R5 595 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 BLZF1Q9H2G9 400 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 CUEDC2Q9H467 287 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 HAUS4Q9H6D7 363 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 LZTFL1Q9NQ48 299 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 CUEDC1Q9NWM3 386 aaPredicted RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 CAPN11Q9UMQ6 739 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 PCDHA4Q9UN74 947 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 GDAQ9Y2T3 454 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 HRH3Q9Y5N1 445 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 EPN1Q9Y6I3 576 aaPredicted RBP6.41□□□□□ -1.38
VPS33A-203ENST00000536212 SCN7AQ01118 1682 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 SPATA31A1Q5TZJ5 1347 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 FAM205AQ6ZU69 1335 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 DOT1LQ8TEK3 1739 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 ROBO3Q96MS0 1386 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 A0A1B0GUL6 1792 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 STRCQ7RTU9 1775 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF831Q5JPB2 1677 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CTAGE15A4D2H0 777 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 WTIPA6NIX2 430 aaPredicted RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 RASSF10A6NK89 507 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 H3BQF6 201 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 MEN1O00255 615 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 POLR3GO15318 223 aaPredicted RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 RPS6KA5O75582 802 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 NDUFA10O95299 355 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CTAGE8P0CG41 777 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 SRGNP10124 158 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CYP2D6P10635 497 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CDC25AP30304 524 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 HOXA7P31268 230 aaPredicted RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CCT6AP40227 531 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 STAT6P42226 847 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 DNM2P50570 870 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 HNRNPH2P55795 449 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CDK17Q00537 523 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 TAGLNQ01995 201 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 GPS2Q13227 327 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 MTMR3Q13615 1198 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 SLC35G1Q2M3R5 365 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 FIGNQ5HY92 759 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 C12orf60Q5U649 245 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 PAPD7Q5XG87 772 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 C16orf46Q6P387 395 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CTAGE6Q86UF2 777 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CTAGE4Q8IX94 777 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 MARCH10Q8NA82 808 aaPredicted RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 GIMAP8Q8ND71 665 aaPredicted RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 NEDD1Q8NHV4 660 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 STAMQ92783 540 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CELF1Q92879 486 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 SECISBP2LQ93073 1101 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 GMCL1Q96IK5 515 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 AK8Q96MA6 479 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 AGBL1Q96MI9 1066 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 NLRP3Q96P20 1036 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 PNKPQ96T60 521 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CHP1Q99653 195 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 LZTS2Q9BRK4 669 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 C2orf49Q9BVC5 232 aaPredicted RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 NUP58Q9BVL2 599 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 TTYH3Q9C0H2 523 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 ANKRD2Q9GZV1 360 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 VPS16Q9H269 839 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 ABCB6Q9NP58 842 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 DISC1Q9NRI5 854 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 IL17RBQ9NRM6 502 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 PUF60Q9UHX1 559 aaKnown RBP6.4□□□□□ -1.38
VPS33A-203ENST00000536212 MYO6Q9UM54 1294 aa6.4□□□□□ -1.38
VPS33A-203ENST00000536212 CNTNAP4Q9C0A0 1308 aa6.4□□□□□ -1.39
VPS33A-203ENST00000536212 AHDC1Q5TGY3 1603 aaPredicted RBP6.39□□□□□ -1.39
VPS33A-203ENST00000536212 ROBO1Q9Y6N7 1651 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms