RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 UTP14CQ5TAP6 766 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 NFRKBQ6P4R8 1299 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SEPT1Q8WYJ6 367 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SLC5A5Q92911 643 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CTAGE1Q96RT6 745 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TRPV6Q9H1D0 765 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 FOXP1Q9H334 677 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TUT1Q9H6E5 874 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KCNMB3Q9NPA1 279 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TRMT13Q9NUP7 481 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 DDX25Q9UHL0 483 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MROH7Q68CQ1 1323 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TANC1Q9C0D5 1861 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 DCDC2CA8MYV0 355 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CCNT1O60563 726 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 LGR5O75473 907 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PSMD10O75832 226 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SAFBQ15424 915 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GDF6Q6KF10 455 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 B3GNT9Q6UX72 402 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 HAS1Q92839 578 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KATNAL1Q9BW62 490 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KAT6AQ92794 2004 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
TNFRSF1A-208ENST00000536194 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KIAA0355O15063 1070 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 HOXC8P31273 242 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ZNF200P98182 395 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 FAM47CQ5HY64 1035 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 LRCH2Q5VUJ6 765 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ABHD15Q6UXT9 468 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 NOSTRINQ8IVI9 506 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 RIT2Q99578 217 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 UNC45AQ9H3U1 944 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PRDM5Q9NQX1 630 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TBC1D22BQ9NU19 505 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GTF2IRD1Q9UHL9 959 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GAS7O60861 476 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SUPT20HL2P0C7V6 817 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CYP2C9P11712 490 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MARK3P27448 753 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PTPN11Q06124 597 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 NBR1Q14596 966 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 LARP1BQ659C4 914 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CCDC60Q8IWA6 550 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TMEM39AQ9NV64 488 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 VAV3Q9UKW4 847 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 UMODL1Q5DID0 1318 aa12.8□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SIP14410 1827 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 RBAK-RBAKDNI3L0D1 243 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TLR3O15455 904 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CHMP2AO43633 222 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SMIM10L2AP0DMW4 78 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SMIM10L2BP0DMW5 78 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ATP2B1P20020 1258 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ATP4AP20648 1035 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MCM7P33993 719 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MAGEA10P43363 369 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ADAM17P78536 824 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KRT76Q01546 638 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GLG1Q92896 1179 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 WNT8BQ93098 351 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 NAP1L4Q99733 375 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TMEM60Q9H2L4 133 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SMARCAD1Q9H4L7 1026 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ZNF215Q9UL58 517 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MYH15Q9Y2K3 1946 aa12.79□□□□□ -0.36
TNFRSF1A-208ENST00000536194 H3BQV1 296 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 EML1O00423 815 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 TBX3O15119 743 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 STAT5BP51692 787 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MDM2Q00987 491 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 SPIRE1Q08AE8 756 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 GNL2Q13823 731 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ZNF174Q15697 407 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 PTGISQ16647 500 aa12.78□□□□□ -0.36
TNFRSF1A-208ENST00000536194 UGCGQ16739 394 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms