RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 MRPS9P82933 396 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 MKRN4PQ13434 485 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TCEAL5Q5H9L2 206 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TTC22Q5TAA0 569 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PCNX4Q63HM2 1172 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CASC1Q6TDU7 716 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 KHSRPQ92945 711 aaKnown RBP eCLIP14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 C11orf84Q9BUA3 381 aaPredicted RBP14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 DOCK5Q9H7D0 1870 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 ADGRA3Q8IWK6 1321 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GHRP10912 638 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TCF7P36402 384 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TROAPQ12815 778 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PPFIA1Q13136 1202 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 NFXL1Q6ZNB6 911 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 EXOC6Q8TAG9 804 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 NEK9Q8TD19 979 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GLG1Q92896 1179 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SENP7Q9BQF6 1050 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 LZTS2Q9BRK4 669 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 LMAN2LQ9H0V9 348 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 IL25Q9H293 177 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CD320Q9NPF0 282 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 KAT6AQ92794 2004 aa14.92□□□□□ -0.02
TNFRSF1A-207ENST00000535958 DDAH1O94760 285 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CSPG5O95196 566 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 RPLP2P05387 115 aaKnown RBP14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 RB1P06400 928 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 MARK3P27448 753 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GNAQP50148 359 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SLC35G1Q2M3R5 365 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 FAM26DQ5JW98 314 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 USP17L6PQ6QN14 398 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 RPAINQ86UA6 219 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PPP2R3CQ969Q6 453 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GPRASP2Q96D09 838 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SPZ1Q9BXG8 430 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 BCAS3Q9H6U6 928 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 EHMT1Q9H9B1 1298 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SENP2Q9HC62 589 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 C11orf16Q9NQ32 467 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 ERAP1Q9NZ08 941 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PRKAG3Q9UGI9 489 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TUBE1Q9UJT0 475 aa14.91□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CCDC69A6NI79 296 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SPDYE3A6NKU9 549 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 M0QZ92 97 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 DCXO43602 365 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SEMA3FQ13275 785 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 BTG3Q14201 252 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GRIK4Q16099 956 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 ZNF654Q8IZM8 581 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 MAP3K14Q99558 947 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 POP1Q99575 1024 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 UPF3BQ9BZI7 483 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
TNFRSF1A-207ENST00000535958 RBAK-RBAKDNI3L0D1 243 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 PIK3CDO00329 1044 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 IGBP1P78318 339 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 PTH1RQ03431 593 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 MTMR1Q13613 665 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 SEPT1Q8WYJ6 367 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 MYL10Q9BUA6 226 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 AZI2Q9H6S1 392 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 PSTPIP2Q9H939 334 aa14.89□□□□□ -0.03
TNFRSF1A-207ENST00000535958 C5orf67F2Z3F1 127 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CHRNA1P02708 482 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CALM1P0DP23 149 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CALM2P0DP24 149 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CALM3P0DP25 149 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CHMLP26374 656 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 SMARCA1P28370 1054 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 BMPR1AP36894 532 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 ADAM17P78536 824 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CLUL1Q15846 466 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 RUFY4Q6ZNE9 571 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 TSHZ1Q6ZSZ6 1077 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 OSBPL7Q9BZF2 842 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 SMARCAD1Q9H4L7 1026 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 TRPC6Q9Y210 931 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 SUPT16HQ9Y5B9 1047 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 CDY2AQ9Y6F7 541 aa14.88□□□□□ -0.03
TNFRSF1A-207ENST00000535958 RRN3P2A6NIE6 340 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 MEIS2O14770 477 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 PRC1O43663 620 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 MRPS6P82932 125 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 ZP2Q05996 745 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 LPIN1Q14693 890 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 IER5Q5VY09 327 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 ADHFE1Q8IWW8 467 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 MB21D2Q8IYB1 491 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 TMTC2Q8N394 836 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 IGDCC4Q8TDY8 1250 aa14.87□□□□□ -0.03
TNFRSF1A-207ENST00000535958 PLVAPQ9BX97 442 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms