RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 CTDP1Q9Y5B0 961 aaPredicted RBP20.29■□□□□ 0.84
HTATSF1-204ENST00000535601 PSMD10O75832 226 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 SLITRK3O94933 977 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 GUF1Q8N442 669 aaKnown RBP20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 ERMNQ8TAM6 284 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 SMCR8Q8TEV9 937 aaPredicted RBP20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 SLC38A10Q9HBR0 1119 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 PCDHA2Q9Y5H9 948 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 LRRC55Q6ZSA7 311 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 ZNF710Q8N1W2 664 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 PICK1Q9NRD5 415 aa20.28■□□□□ 0.84
HTATSF1-204ENST00000535601 TRIM21P19474 475 aaKnown RBP20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 KIF18AQ8NI77 898 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 PANX2Q96RD6 677 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 PPP1R9AQ9ULJ8 1098 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 ADM5C9JUS6 153 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 IPO5O00410 1097 aaKnown RBP20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 PLS1Q14651 629 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 CCDC65Q8IXS2 484 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 SCYL3Q8IZE3 742 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 CRACR2AQ9BSW2 395 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 ZNF215Q9UL58 517 aaPredicted RBP20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
HTATSF1-204ENST00000535601 TBX3O15119 743 aa20.27■□□□□ 0.83
HTATSF1-204ENST00000535601 TERF1P54274 439 aa20.27■□□□□ 0.83
HTATSF1-204ENST00000535601 BACE1P56817 501 aa20.27■□□□□ 0.83
HTATSF1-204ENST00000535601 MRPS9P82933 396 aaKnown RBP20.27■□□□□ 0.83
HTATSF1-204ENST00000535601 TRERF1Q96PN7 1200 aa20.27■□□□□ 0.83
HTATSF1-204ENST00000535601 KCNH7Q9NS40 1196 aa20.27■□□□□ 0.83
HTATSF1-204ENST00000535601 LTBP3Q9NS15 1303 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 GNG11P61952 73 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 MOB2Q70IA6 237 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 ZNF280CQ8ND82 737 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 SYTL5Q8TDW5 730 aaPredicted RBP20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 TRIM10Q9UDY6 481 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 TELO2Q9Y4R8 837 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.26■□□□□ 0.832e-8■■■■■ 28.6
HTATSF1-204ENST00000535601 CNGA4Q8IV77 575 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 SAMM50Q9Y512 469 aa20.26■□□□□ 0.83
HTATSF1-204ENST00000535601 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 VWA5AO00534 786 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 TPM1P09493 284 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 SYT2Q8N9I0 419 aaPredicted RBP20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 LPAR1Q92633 364 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 SLC5A5Q92911 643 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 HSD17B14Q9BPX1 270 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 ADGRG1Q9Y653 693 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 DOCK5Q9H7D0 1870 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 HSD17B4P51659 736 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 SP4Q02446 784 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 ZC2HC1CQ53FD0 456 aaPredicted RBP20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 ITIH6Q6UXX5 1313 aa20.25■□□□□ 0.83
HTATSF1-204ENST00000535601 TFRCP02786 760 aaKnown RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 NMT1P30419 496 aaKnown RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 HOXD13P35453 343 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 ETF1P62495 437 aaKnown RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 ITGB3BPQ13352 177 aaPredicted RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 MMRN2Q9H8L6 949 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 RNF181Q9P0P0 153 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 DOCK1Q14185 1865 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 DYNC1I1O14576 645 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 CLIC2O15247 247 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 PLA2G6O60733 806 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 ATP9AO75110 1047 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 PLEKP08567 350 aaPredicted RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 BAATQ14032 418 aaPredicted RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 DCAF15Q66K64 600 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 SNRNP48Q6IEG0 339 aaKnown RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 RINT1Q6NUQ1 792 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 MXRA8Q9BRK3 442 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 LXNQ9BS40 222 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 KCND1Q9NSA2 647 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 LUC7L2Q9Y383 392 aaKnown RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 LMNB1P20700 586 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 DNM2P50570 870 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 CCDC40Q4G0X9 1142 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 KLRG1Q96E93 195 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 NDST4Q9H3R1 872 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 PAXBP1Q9Y5B6 917 aa20.24■□□□□ 0.83
HTATSF1-204ENST00000535601 MYH11P35749 1972 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 ZCWPW2Q504Y3 356 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 WDR59Q6PJI9 974 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 RMDN3Q96TC7 470 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 LRRC27Q9C0I9 530 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 RNF146Q9NTX7 359 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 ZSCAN12O43309 604 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 URI1O94763 535 aaPredicted RBP20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 GCNT3O95395 438 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 KCNJ6P48051 423 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 SBF1O95248 1867 aa20.23■□□□□ 0.83
HTATSF1-204ENST00000535601 VWA3BQ502W6 1294 aa20.22■□□□□ 0.83
HTATSF1-204ENST00000535601 MCTP2Q6DN12 878 aa20.22■□□□□ 0.83
HTATSF1-204ENST00000535601 TSG101Q99816 390 aa20.22■□□□□ 0.83
HTATSF1-204ENST00000535601 CCDC175P0C221 793 aa20.22■□□□□ 0.83
HTATSF1-204ENST00000535601 TKFCQ3LXA3 575 aa20.22■□□□□ 0.83
HTATSF1-204ENST00000535601 RNF207Q6ZRF8 634 aa20.22■□□□□ 0.83
HTATSF1-204ENST00000535601 NOC3LQ8WTT2 800 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms