RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	C9orf172	C9J069	976 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ITGAV	P06756	1048 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	SP3	Q02447	781 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ADGRE1	Q14246	886 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MBTPS1	Q14703	1052 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PODN	Q7Z5L7	613 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	FILIP1	Q7Z7B0	1213 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ARMC10	Q8N2F6	343 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	U2AF1L4	Q8WU68	220 aa	Known RBP	6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ASAP1	Q9ULH1	1129 aa		6.14	□□□□□ -1.43
ECHDC1-223	ENST00000534442	COL5A3	P25940	1745 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	DNAJC6	O75061	913 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	NAT2	P11245	290 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CCL5	P13501	91 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PDE6B	P35913	854 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	NRG1	Q02297	640 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	TFF2	Q03403	129 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	AUH	Q13825	339 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	TCEA2	Q15560	299 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	C21orf62-AS1	Q17RA5	79 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	YOD1	Q5VVQ6	348 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	DGLUCY	Q7Z3D6	616 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ZNF227	Q86WZ6	799 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	DZIP1L	Q8IYY4	767 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PRSS33	Q8NF86	280 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	KISS1R	Q969F8	398 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MEGF10	Q96KG7	1140 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	EXOC2	Q96KP1	924 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MYRFL	Q96LU7	910 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	BRINP2	Q9C0B6	783 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MKRN2	Q9H000	416 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	SLK	Q9H2G2	1235 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	SPC25	Q9HBM1	224 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	C1GALT1	Q9NS00	363 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PRKAB1	Q9Y478	270 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	RAB3GAP2	Q9H2M9	1393 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PTPN13	Q12923	2485 aa		6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	RIF1	Q5UIP0	2472 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-223	ENST00000534442	AGRP	O00253	132 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	TBX1	O43435	398 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	LRRN2	O75325	713 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	EOMES	O95936	686 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	BMP3	P12645	472 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CD247	P20963	164 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MAP4	P27816	1152 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	L1CAM	P32004	1257 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	KDR	P35968	1356 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MASP1	P48740	699 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	GMPS	P49915	693 aa	Predicted RBP	6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PPP2R2A	P63151	447 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	RNF4	P78317	190 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CDK5R2	Q13319	367 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CBX2	Q14781	532 aa	Predicted RBP	6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	NBPF9	Q3BBW0	867 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ZC3H12B	Q5HYM0	836 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	FAM209A	Q5JX71	171 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ATRNL1	Q5VV63	1379 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	WDR87	Q6ZQQ6	2873 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MYH14	Q7Z406	1995 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	FAM20C	Q8IXL6	584 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	SYNPO	Q8N3V7	929 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	LRRN4CL	Q8ND94	238 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	RNF141	Q8WVD5	230 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	NACC1	Q96RE7	527 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CDK19	Q9BWU1	502 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	GP6	Q9HCN6	339 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	COL4A3BP	Q9Y5P4	624 aa		6.12	□□□□□ -1.43
ECHDC1-223	ENST00000534442	FAM205A	Q6ZU69	1335 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	LEFTY1	O75610	366 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ETV3	P41162	512 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	GRIA2	P42262	883 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PRKG1	Q13976	671 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MAP7	Q14244	749 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	UVSSA	Q2YD98	709 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	STYK1	Q6J9G0	422 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MOB2	Q70IA6	237 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ADAT2	Q7Z6V5	191 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	RTKN2	Q8IZC4	609 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	TOP6BL	Q8N6T0	577 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	PAWR	Q96IZ0	340 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	MRGPRX3	Q96LB0	322 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	AARSD1	Q9BTE6	412 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	DHRS4	Q9BTZ2	278 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	YIPF2	Q9BWQ6	316 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ASPN	Q9BXN1	380 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	GBP3	Q9H0R5	595 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	C14orf93	Q9H972	538 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CWC22	Q9HCG8	908 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	LRP2BP	Q9P2M1	347 aa		6.11	□□□□□ -1.43
ECHDC1-223	ENST00000534442	KIF24	Q5T7B8	1368 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	TRAV20	A0A0B4J274	112 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	SHTN1	A0MZ66	631 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ZNF445	P59923	1031 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	CRHR2	Q13324	411 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	HSP90AA2P	Q14568	343 aa	Predicted RBP	6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	AKNAD1	Q5T1N1	836 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	FAM214B	Q7L5A3	538 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	ARHGEF39	Q8N4T4	335 aa		6.1	□□□□□ -1.43
ECHDC1-223	ENST00000534442	BVES	Q8NE79	360 aa		6.1	□□□□□ -1.43

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