RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CTSHP09668 335 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 CPA1P15085 419 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 POU3F3P20264 500 aaPredicted RBP10.2□□□□□ -0.78
COPB1-211ENST00000534234 CDC27P30260 824 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 ADD1P35611 737 aaKnown RBP10.2□□□□□ -0.78
COPB1-211ENST00000534234 ADAM17P78536 824 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 ARHGAP4P98171 946 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 FAM117BQ6P1L5 589 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.2□□□□□ -0.784e-8■□□□□ 10.6
COPB1-211ENST00000534234 LMBR1Q8WVP7 490 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 ATXN2LQ8WWM7 1075 aaKnown RBP10.2□□□□□ -0.78
COPB1-211ENST00000534234 GLG1Q92896 1179 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 MXRA8Q9BRK3 442 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 KCNH7Q9NS40 1196 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
COPB1-211ENST00000534234 THEGQ9P2T0 379 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 MTCH2Q9Y6C9 303 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 UNC80Q8N2C7 3258 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 NRCAMQ92823 1304 aa10.2□□□□□ -0.78
COPB1-211ENST00000534234 BAZ2BQ9UIF8 2168 aaKnown RBP10.19□□□□□ -0.78
COPB1-211ENST00000534234 EPOPA6NHQ4 379 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 hCG_1984214I3L0E3 225 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 ADCY7P51828 1080 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 RCAN1P53805 252 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 PLEKHG4Q58EX7 1191 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 TEX2Q8IWB9 1127 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 MYOCDQ8IZQ8 938 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 ZNF713Q8N859 430 aaPredicted RBP10.19□□□□□ -0.78
COPB1-211ENST00000534234 CYP2W1Q8TAV3 490 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 SEPT8Q92599 483 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 KCNB2Q92953 911 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 PGBD1Q96JS3 809 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 JAKMIP1Q96N16 626 aaKnown RBP10.19□□□□□ -0.78
COPB1-211ENST00000534234 ASB2Q96Q27 587 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 OSBPL7Q9BZF2 842 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
COPB1-211ENST00000534234 SMARCAD1Q9H4L7 1026 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 BARHL2Q9NY43 387 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 ERAP1Q9NZ08 941 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 CHD9Q3L8U1 2897 aa10.19□□□□□ -0.78
COPB1-211ENST00000534234 CCDC196A0A1B0GTZ2 297 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 STXBP3O00186 592 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 AMHP03971 560 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 ARP10275 920 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 MARK3P27448 753 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 HSPA4P34932 840 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 METAP2P50579 478 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■■■■□ 21.6
COPB1-211ENST00000534234 MRPS5P82675 430 aaKnown RBP10.18□□□□□ -0.78
COPB1-211ENST00000534234 APOBRQ0VD83 1088 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 PPFIA1Q13136 1202 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 SKIV2LQ15477 1246 aaKnown RBP10.18□□□□□ -0.78
COPB1-211ENST00000534234 CEP55Q53EZ4 464 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 KRT40Q6A162 431 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 Q6ZUG5 572 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 BRF1Q92994 677 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 ANO3Q9BYT9 981 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 GLT8D2Q9H1C3 349 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 TMEM260Q9NX78 707 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 SLC9A2Q9UBY0 812 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 MTUS1Q9ULD2 1270 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 INSL6Q9Y581 213 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 SNX14Q9Y5W7 946 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 KIAA1217Q5T5P2 1943 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 ABCB7O75027 752 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 ZNF76P36508 570 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 GRB10Q13322 594 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 MKRN4PQ13434 485 aaPredicted RBP10.18□□□□□ -0.78
COPB1-211ENST00000534234 GRIK4Q16099 956 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 FAM26DQ5JW98 314 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 TAF2Q6P1X5 1199 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 BLOC1S2Q6QNY1 142 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 SDF4Q9BRK5 362 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 AZI2Q9H6S1 392 aa10.18□□□□□ -0.78
COPB1-211ENST00000534234 JPH1Q9HDC5 661 aaPredicted RBP10.18□□□□□ -0.78
COPB1-211ENST00000534234 CUL9Q8IWT3 2517 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 EYSQ5T1H1 3165 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 LINC01553A4QN01 128 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 MEIS1O00470 390 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 LPXNO60711 386 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 UPP2O95045 317 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 REC8O95072 547 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 CHRNA1P02708 482 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 SCG2P13521 617 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 INSRRP14616 1297 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 SREBF1P36956 1147 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 ERVK-21P61565 698 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 IGBP1P78318 339 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 AP3B2Q13367 1082 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
COPB1-211ENST00000534234 MARCH8Q5T0T0 291 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 JAKMIP3Q5VZ66 844 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 RUFY4Q6ZNE9 571 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 RPAINQ86UA6 219 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 RSPH3Q86UC2 560 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 APBB2Q92870 758 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 TNPO1Q92973 898 aaKnown RBP10.17□□□□□ -0.78
COPB1-211ENST00000534234 TOP1MTQ969P6 601 aa10.17□□□□□ -0.78
COPB1-211ENST00000534234 TGS1Q96RS0 853 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms