RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 PPP2R5CQ13362 524 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 NBR1Q14596 966 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 SF3A1Q15459 793 aaKnown RBP15.87■□□□□ 0.13
CMTM1-218ENST00000533915 KCNA10Q16322 511 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 HSDL1Q3SXM5 330 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 TMEM63BQ5T3F8 832 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 FAM160B1Q5W0V3 765 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 MIER3Q7Z3K6 550 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 ERMNQ8TAM6 284 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 HAS1Q92839 578 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 GLT1D1Q96MS3 346 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 KATNAL1Q9BW62 490 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 SEZ6LQ9BYH1 1024 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 WNT7AO00755 349 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 BACH1O14867 736 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 CHMP2AO43633 222 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 DKC1O60832 514 aaKnown RBP eCLIP15.86■□□□□ 0.13
CMTM1-218ENST00000533915 HOXD8P13378 290 aaPredicted RBP15.86■□□□□ 0.13
CMTM1-218ENST00000533915 TCF7P36402 384 aaPredicted RBP15.86■□□□□ 0.13
CMTM1-218ENST00000533915 ACLYP53396 1101 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 KRT85P78386 507 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 BEX3Q00994 111 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 PDIA5Q14554 519 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 STK38Q15208 465 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 GLG1Q92896 1179 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 FERMT2Q96AC1 680 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 VTI1AQ96AJ9 217 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 MTG1Q9BT17 334 aaPredicted RBP15.86■□□□□ 0.13
CMTM1-218ENST00000533915 TMEM60Q9H2L4 133 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 SMARCAD1Q9H4L7 1026 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 DISC1Q9NRI5 854 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 DOCK5Q9H7D0 1870 aa15.86■□□□□ 0.13
CMTM1-218ENST00000533915 YEATS4O95619 227 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 ASGR1P07306 291 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 SUPT20HL2P0C7V6 817 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
CMTM1-218ENST00000533915 SLC26A2P50443 739 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
CMTM1-218ENST00000533915 CEBPZQ03701 1054 aaKnown RBP15.85■□□□□ 0.13
CMTM1-218ENST00000533915 NCAPH2Q6IBW4 605 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 FAM173BQ6P4H8 233 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 NECAB2Q7Z6G3 386 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 C4orf32Q8N8J7 132 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 ATP6V0A1Q93050 837 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 UNC45AQ9H3U1 944 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 VAV3Q9UKW4 847 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 PHF24Q9UPV7 400 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 ZDHHC9Q9Y397 364 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 MORC2Q9Y6X9 1032 aaPredicted RBP15.85■□□□□ 0.13
CMTM1-218ENST00000533915 MYH15Q9Y2K3 1946 aa15.85■□□□□ 0.13
CMTM1-218ENST00000533915 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 GSTTP1A0A1W2PQM5 241 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 MYADML2A6NDP7 307 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 CTAGE5O15320 804 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 ATG7O95352 703 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 CCNE2O96020 404 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 LGALS2P05162 132 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 TECP42680 631 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 NASPP49321 788 aaPredicted RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 PURAQ00577 322 aaKnown RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 SLC39A14Q15043 492 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 HAUS3Q68CZ6 603 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 CCSAPQ6IQ19 270 aaPredicted RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 ABHD15Q6UXT9 468 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 PLPPR4Q7Z2D5 763 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 NEK9Q8TD19 979 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 KCNG4Q8TDN1 519 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 GJA10Q969M2 543 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 USP28Q96RU2 1077 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
CMTM1-218ENST00000533915 BCAS3Q9H6U6 928 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 ZNF302Q9NR11 478 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 CLIC4Q9Y696 253 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 EMSYQ7Z589 1322 aa15.84■□□□□ 0.13
CMTM1-218ENST00000533915 PTGS1P23219 599 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 STAT5BP51692 787 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 DNM1Q05193 864 aaKnown RBP15.83■□□□□ 0.12
CMTM1-218ENST00000533915 EPHA7Q15375 998 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 CXCL17Q6UXB2 119 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 AK8Q96MA6 479 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 C11orf49Q9H6J7 331 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 STARD7Q9NQZ5 370 aa15.83■□□□□ 0.12
CMTM1-218ENST00000533915 TFIP11Q9UBB9 837 aaKnown RBP15.83■□□□□ 0.12
CMTM1-218ENST00000533915 A0A1W2PQ45 241 aaPredicted RBP15.82■□□□□ 0.12
CMTM1-218ENST00000533915 A0A1W2PQY0 241 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 VWA3AA6NCI4 1184 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 H3BRB1 525 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 SPTLC2O15270 562 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 PPP6R2O75170 966 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 LGR5O75473 907 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 F2P00734 622 aa15.82■□□□□ 0.12
CMTM1-218ENST00000533915 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
CMTM1-218ENST00000533915 EN2P19622 333 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms