RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZNF236Q9UL36 1845 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 CHMP2AO43633 222 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 TXLNAP40222 546 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 SARSP49591 514 aaKnown RBP20.72■□□□□ 0.91
SMPD1-208ENST00000533123 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 NCAPH2Q6IBW4 605 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 SMARCE1Q969G3 411 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 CDHR1Q96JP9 859 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 RIT2Q99578 217 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 BCAS3Q9H6U6 928 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 LRRC37A2A6NM11 1700 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 GPR25O00155 361 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 HOXC6P09630 235 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 RGS2P41220 211 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 SP2Q02086 613 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 MAMDC4Q6UXC1 1216 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 PLIN2Q99541 437 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 MTRQ99707 1265 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 TINF2Q9BSI4 451 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 MMTAG2Q9BU76 263 aaKnown RBP20.72■□□□□ 0.91
SMPD1-208ENST00000533123 TEKT3Q9BXF9 490 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 FLRT1Q9NZU1 646 aa20.72■□□□□ 0.91
SMPD1-208ENST00000533123 KCNA2P16389 499 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 ICAM3P32942 547 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 KIF22Q14807 665 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 CCL14Q16627 93 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 CABP7Q86V35 215 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 BPIFA3Q9BQP9 254 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 UNC45AQ9H3U1 944 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 DISC1Q9NRI5 854 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 TBC1D22BQ9NU19 505 aa20.71■□□□□ 0.91
SMPD1-208ENST00000533123 EML1O00423 815 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 SORBS3O60504 671 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 SNAI1O95863 264 aaPredicted RBP20.7■□□□□ 0.9
SMPD1-208ENST00000533123 RASSF8Q8NHQ8 419 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 SPATA20Q8TB22 786 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 LRRC15Q8TF66 581 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 CCSER1Q9C0I3 900 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 PDGFCQ9NRA1 345 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.7■□□□□ 0.9
SMPD1-208ENST00000533123 TSKSQ9UJT2 592 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 GABRQQ9UN88 632 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 STAT6P42226 847 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 MAP2K1Q02750 393 aaPredicted RBP20.7■□□□□ 0.9
SMPD1-208ENST00000533123 PPP2R5CQ13362 524 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 NAALADL2Q58DX5 795 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 CD99L2Q8TCZ2 262 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 SNX29Q8TEQ0 813 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 SAGE1Q9NXZ1 904 aa20.7■□□□□ 0.9
SMPD1-208ENST00000533123 HTTP42858 3142 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 DPYDQ12882 1025 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 KRT79Q5XKE5 535 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 BLZF1Q9H2G9 400 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 DOCK5Q9H7D0 1870 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 ARIH2O95376 493 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 FLT3LGP49771 235 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 MORC3Q14149 939 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 LY6KQ17RY6 165 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 B3GNT9Q6UX72 402 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 APBA2Q99767 749 aa20.69■□□□□ 0.9
SMPD1-208ENST00000533123 PYM1Q9BRP8 204 aaKnown RBP20.69■□□□□ 0.9
SMPD1-208ENST00000533123 PRKCZQ05513 592 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 BEGAINQ9BUH8 593 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 KATNBL1Q9H079 304 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 SYNGAP1Q96PV0 1343 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 SMC2O95347 1197 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 TGFB3P10600 412 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 UBA1P22314 1058 aaKnown RBP20.68■□□□□ 0.9
SMPD1-208ENST00000533123 NCAPHQ15003 741 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 TMEM63BQ5T3F8 832 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 RRAGBQ5VZM2 374 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 CYFIP1Q7L576 1253 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 ZNF296Q8WUU4 475 aaPredicted RBP20.68■□□□□ 0.9
SMPD1-208ENST00000533123 TRIM5Q9C035 493 aa20.68■□□□□ 0.9
SMPD1-208ENST00000533123 CYP2C19P33261 490 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 CCT6AP40227 531 aaKnown RBP20.67■□□□□ 0.9
SMPD1-208ENST00000533123 SP4Q02446 784 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 CUL4BQ13620 913 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 ECM1Q16610 540 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 TAPT1Q6NXT6 567 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 MSL3Q8N5Y2 521 aaKnown RBP20.67■□□□□ 0.9
SMPD1-208ENST00000533123 DNAJC5GQ8N7S2 189 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 SENP7Q9BQF6 1050 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 VTA1Q9NP79 307 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 CCDC39Q9UFE4 941 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 DDX41Q9UJV9 622 aaKnown RBP20.67■□□□□ 0.9
SMPD1-208ENST00000533123 TELO2Q9Y4R8 837 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 SAMM50Q9Y512 469 aa20.67■□□□□ 0.9
SMPD1-208ENST00000533123 CCNE2O96020 404 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 PTMAP06454 111 aaKnown RBP20.66■□□□□ 0.9
SMPD1-208ENST00000533123 PLCG1P19174 1290 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 CYP4A11Q02928 519 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 PRAMEF19Q5SWL8 479 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 CALML4Q96GE6 196 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 EIF2AK1Q9BQI3 630 aaKnown RBP20.66■□□□□ 0.9
SMPD1-208ENST00000533123 ABHD16BQ9H3Z7 469 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 JPH1Q9HDC5 661 aaPredicted RBP20.66■□□□□ 0.9
SMPD1-208ENST00000533123 RGL1Q9NZL6 768 aa20.66■□□□□ 0.9
SMPD1-208ENST00000533123 NFASCO94856 1347 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms