RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 CHD1LQ86WJ1 897 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.28
CMTM1-216ENST00000533078 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-216ENST00000533078 CDHR1Q96JP9 859 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 INPP4AQ96PE3 977 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-216ENST00000533078 PIGSQ96S52 555 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 GPR20Q99678 358 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 SENP7Q9BQF6 1050 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 PLVAPQ9BX97 442 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 M0QZ92 97 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 IFIT3O14879 490 aaKnown RBP13.32□□□□□ -0.28
CMTM1-216ENST00000533078 GHRP10912 638 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 NDUFV1P49821 464 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 NHLH1Q02575 133 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
CMTM1-216ENST00000533078 GRM4Q14833 912 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 COL19A1Q14993 1142 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 SMAD2Q15796 467 aaKnown RBP13.32□□□□□ -0.28
CMTM1-216ENST00000533078 CLUL1Q15846 466 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 TNPO1Q92973 898 aaKnown RBP13.32□□□□□ -0.28
CMTM1-216ENST00000533078 IGFLR1Q9H665 355 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
CMTM1-216ENST00000533078 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
CMTM1-216ENST00000533078 MYO7AQ13402 2215 aa13.32□□□□□ -0.28
CMTM1-216ENST00000533078 STXBP3O00186 592 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 CSPG5O95196 566 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 IRS1P35568 1242 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 PPFIA1Q13136 1202 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 WTAPQ15007 396 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 SEC23AQ15436 765 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 PKN1Q16512 942 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 PLEKHM2Q8IWE5 1019 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 GLG1Q92896 1179 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 CLP1Q92989 425 aaKnown RBP13.31□□□□□ -0.28
CMTM1-216ENST00000533078 FBXL18Q96ME1 805 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 FTHL17Q9BXU8 183 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 CD207Q9UJ71 328 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
CMTM1-216ENST00000533078 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
CMTM1-216ENST00000533078 GRM6O15303 877 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 MBTPS2O43462 519 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 MMP1P03956 469 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
CMTM1-216ENST00000533078 MRPS9P82933 396 aaKnown RBP13.3□□□□□ -0.28
CMTM1-216ENST00000533078 HYAL1Q12794 435 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 PCNX4Q63HM2 1172 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 TSHZ1Q6ZSZ6 1077 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 HFE2Q6ZVN8 426 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
CMTM1-216ENST00000533078 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
CMTM1-216ENST00000533078 PRRX2Q99811 253 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 MUTYHQ9UIF7 546 aa13.3□□□□□ -0.28
CMTM1-216ENST00000533078 CHRNA1P02708 482 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 STAG3L1P0CL83 205 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 KIF5BP33176 963 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 LTBRP36941 435 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 NUCB1Q02818 461 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 HERC4Q5GLZ8 1057 aaPredicted RBP13.29□□□□□ -0.28
CMTM1-216ENST00000533078 IER5Q5VY09 327 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 SUGP1Q8IWZ8 645 aaKnown RBP13.29□□□□□ -0.28
CMTM1-216ENST00000533078 NCOA7Q8NI08 942 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 PIBF1Q8WXW3 757 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 SEPT1Q8WYJ6 367 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 P2RX5Q93086 422 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
CMTM1-216ENST00000533078 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
CMTM1-216ENST00000533078 DOCK5Q9H7D0 1870 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 FSD2A1L4K1 749 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 RRN3P2A6NIE6 340 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 ENPP3O14638 875 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 MARK3P27448 753 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 ADAM17P78536 824 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 LPIN1Q14693 890 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 GRIK4Q16099 956 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 RNF135Q8IUD6 432 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 CMTR2Q8IYT2 770 aaKnown RBP13.28□□□□□ -0.28
CMTM1-216ENST00000533078 DNAJB3Q8WWF6 145 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 GPRASP2Q96D09 838 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 OSBPL7Q9BZF2 842 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 EHMT1Q9H9B1 1298 aa13.28□□□□□ -0.28
CMTM1-216ENST00000533078 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms