RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 RIT2Q99578 217 aa28.09■■■□□ 2.09
USP48-214ENST00000532737 F2P00734 622 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 LGALS2P05162 132 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 HSP90AA1P07900 732 aaKnown RBP28.08■■■□□ 2.09
USP48-214ENST00000532737 NBPF20Q3BBV1 942 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 POTEDQ86YR6 584 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 SPRYD3Q8NCJ5 442 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 KCNMB3Q9NPA1 279 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 ATP11BQ9Y2G3 1177 aa28.08■■■□□ 2.09
USP48-214ENST00000532737 PSMD10O75832 226 aa28.07■■■□□ 2.08
USP48-214ENST00000532737 PSEN2P49810 448 aa28.07■■■□□ 2.08
USP48-214ENST00000532737 CHMP4BP1P59074 171 aa28.07■■■□□ 2.08
USP48-214ENST00000532737 TLE2Q04725 743 aa28.07■■■□□ 2.08
USP48-214ENST00000532737 LRCH2Q5VUJ6 765 aa28.07■■■□□ 2.08
USP48-214ENST00000532737 TRIM50Q86XT4 487 aa28.07■■■□□ 2.08
USP48-214ENST00000532737 VPS37CA5D8V6 355 aaPredicted RBP28.06■■■□□ 2.08
USP48-214ENST00000532737 HAS3O00219 553 aa28.06■■■□□ 2.08
USP48-214ENST00000532737 GAS7O60861 476 aa28.06■■■□□ 2.08
USP48-214ENST00000532737 ATG7O95352 703 aa28.06■■■□□ 2.08
USP48-214ENST00000532737 TOB1P50616 345 aaPredicted RBP28.06■■■□□ 2.08
USP48-214ENST00000532737 HAS1Q92839 578 aa28.06■■■□□ 2.08
USP48-214ENST00000532737 PCYT2Q99447 389 aa28.06■■■□□ 2.08
USP48-214ENST00000532737 TEKT3Q9BXF9 490 aa28.06■■■□□ 2.08
USP48-214ENST00000532737 TRAPPC10P48553 1259 aa28.05■■■□□ 2.08
USP48-214ENST00000532737 KRT76Q01546 638 aa28.05■■■□□ 2.08
USP48-214ENST00000532737 MFSD10Q14728 455 aa28.05■■■□□ 2.08
USP48-214ENST00000532737 ZNF174Q15697 407 aa28.05■■■□□ 2.08
USP48-214ENST00000532737 ZNF746Q6NUN9 644 aaPredicted RBP28.05■■■□□ 2.08
USP48-214ENST00000532737 FAM20AQ96MK3 541 aa28.05■■■□□ 2.08
USP48-214ENST00000532737 NOL7Q9UMY1 257 aaKnown RBP28.05■■■□□ 2.08
USP48-214ENST00000532737 SCN10AQ9Y5Y9 1956 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 H3BRB1 525 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 TBX3O15119 743 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 PQBP1O60828 265 aaKnown RBP28.04■■■□□ 2.08
USP48-214ENST00000532737 LGR5O75473 907 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 MCM7P33993 719 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 NBR1Q14596 966 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 KIAA0753Q2KHM9 967 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 TTC38Q5R3I4 469 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 ABHD15Q6UXT9 468 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 ANKRD33Q7Z3H0 272 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 C7orf61Q8IZ16 206 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 KATNAL1Q9BW62 490 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 UNC45AQ9H3U1 944 aa28.04■■■□□ 2.08
USP48-214ENST00000532737 TUT1Q9H6E5 874 aaKnown RBP28.04■■■□□ 2.08
USP48-214ENST00000532737 B3GNT9Q6UX72 402 aa28.03■■■□□ 2.08
USP48-214ENST00000532737 FERMT3Q86UX7 667 aa28.03■■■□□ 2.08
USP48-214ENST00000532737 TMEM60Q9H2L4 133 aa28.03■■■□□ 2.08
USP48-214ENST00000532737 TCEAL9Q9UHQ7 104 aa28.03■■■□□ 2.08
USP48-214ENST00000532737 MTMR6Q9Y217 621 aa28.03■■■□□ 2.08
USP48-214ENST00000532737 DNAH12Q6ZR08 3092 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 IGKV6D-21A0A0A0MT36 114 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 MARCH6O60337 910 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 NEMFO60524 1076 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 SUPT20HL2P0C7V6 817 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 CALCRLQ16602 461 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 FAM47CQ5HY64 1035 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 NFRKBQ6P4R8 1299 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 FAM126BQ8IXS8 530 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 GLG1Q92896 1179 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 TOX2Q96NM4 488 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 SEZ6LQ9BYH1 1024 aa28.02■■■□□ 2.08
USP48-214ENST00000532737 LAMA3Q16787 3333 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 EMSYQ7Z589 1322 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 A0A1W2PPC1 479 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 CHMP2AO43633 222 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 STX6O43752 255 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 MIS18BP1Q6P0N0 1132 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 SMAP1Q8IYB5 467 aaPredicted RBP28.01■■■□□ 2.07
USP48-214ENST00000532737 MTMR9Q96QG7 549 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 TRPV6Q9H1D0 765 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 SMARCAD1Q9H4L7 1026 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 HDAC6Q9UBN7 1215 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 VAV3Q9UKW4 847 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 ZNF215Q9UL58 517 aaPredicted RBP28.01■■■□□ 2.07
USP48-214ENST00000532737 PCDHB6Q9Y5E3 794 aa28.01■■■□□ 2.07
USP48-214ENST00000532737 DCDC2CA8MYV0 355 aa28■■■□□ 2.07
USP48-214ENST00000532737 WDR64B1ANS9 1081 aa28■■■□□ 2.07
USP48-214ENST00000532737 BAG4O95429 457 aaKnown RBP28■■■□□ 2.07
USP48-214ENST00000532737 FAAP100Q0VG06 881 aa28■■■□□ 2.07
USP48-214ENST00000532737 ORC2Q13416 577 aaPredicted RBP28■■■□□ 2.07
USP48-214ENST00000532737 BECN1Q14457 450 aa28■■■□□ 2.07
USP48-214ENST00000532737 SWSAP1Q6NVH7 229 aa28■■■□□ 2.07
USP48-214ENST00000532737 CCDC60Q8IWA6 550 aaPredicted RBP28■■■□□ 2.07
USP48-214ENST00000532737 SLFN12Q8IYM2 578 aa28■■■□□ 2.07
USP48-214ENST00000532737 C7orf31Q8N865 590 aa28■■■□□ 2.07
USP48-214ENST00000532737 RNPEPQ9H4A4 650 aa28■■■□□ 2.07
USP48-214ENST00000532737 AZI2Q9H6S1 392 aa28■■■□□ 2.07
USP48-214ENST00000532737 DISC1Q9NRI5 854 aa28■■■□□ 2.07
USP48-214ENST00000532737 PCDHA10Q9Y5I2 948 aa28■■■□□ 2.07
USP48-214ENST00000532737 MROH7Q68CQ1 1323 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 BACH1O14867 736 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 STAT5BP51692 787 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 PTPN11Q06124 597 aaPredicted RBP27.99■■■□□ 2.07
USP48-214ENST00000532737 RILPL1Q5EBL4 403 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 SESTD1Q86VW0 696 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 TRMT13Q9NUP7 481 aaKnown RBP27.99■■■□□ 2.07
USP48-214ENST00000532737 ERAP1Q9NZ08 941 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 SAMM50Q9Y512 469 aa27.99■■■□□ 2.07
USP48-214ENST00000532737 B4GALT4O60513 344 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms