RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MYO1FO00160 1098 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 ECE2O60344 883 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 TMEM191BP0C7N4 346 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 ANAPC4Q9UJX5 808 aa16.68■□□□□ 0.26
PCDHA3-202ENST00000532566 TNNC2P02585 160 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 VPS41P49754 854 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 FMR1Q06787 632 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 PPANQ9NQ55 473 aaKnown RBP16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 A0A1W2PQC6 194 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 KRT15P19012 456 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 ALCAMQ13740 583 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 SFR1Q86XK3 245 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 SULF1Q8IWU6 871 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 BCAS4Q8TDM0 211 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 PIGOQ8TEQ8 1089 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 RAB20Q9NX57 234 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 DAGLAQ9Y4D2 1042 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 FLT1P17948 1338 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 MYO3BQ8WXR4 1341 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 MST1RQ04912 1400 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 EIF2AK2P19525 551 aaKnown RBP16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 GRM1Q13255 1194 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 CIAPIN1Q6FI81 312 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 MAGOHBQ96A72 148 aaKnown RBP16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 CEP72Q9P209 647 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 FAM160B1Q5W0V3 765 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 CCDC89Q8N998 374 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 PBKQ96KB5 322 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 ZNF341Q9BYN7 854 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 TRIM9Q9C026 710 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
PCDHA3-202ENST00000532566 A0A1B0GTH6 734 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 GBP1P32455 592 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 ZNF653Q96CK0 615 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 CNTNAP5Q8WYK1 1306 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 NWD1Q149M9 1564 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 ANO9A1A5B4 782 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 SFI1A8K8P3 1242 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 ADCY8P40145 1251 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 E4F1Q66K89 784 aaPredicted RBP16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 JCADQ9P266 1359 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 DPYDQ12882 1025 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 NAA30Q147X3 362 aaPredicted RBP16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 FAM83BQ5T0W9 1011 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 AGXT2Q9BYV1 514 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 HOMER3Q9NSC5 361 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 ARHGAP23Q9P227 1491 aa16.66■□□□□ 0.26
PCDHA3-202ENST00000532566 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 TROAPQ12815 778 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 CASP8Q14790 479 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 PPM1EQ8WY54 764 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 UBE2TQ9NPD8 197 aaPredicted RBP16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 LRRC53A6NM62 1247 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 ABCB6Q9NP58 842 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 FAM114A2Q9NRY5 505 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 LIMA1Q9UHB6 759 aaKnown RBP16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 FAN1Q9Y2M0 1017 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 USP11P51784 963 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 RNF40O75150 1001 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 ATF7P17544 494 aaPredicted RBP16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 PDIA5Q14554 519 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 HADHQ16836 314 aaKnown RBP16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 FAM81BQ96LP2 452 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 VPS37BQ9H9H4 285 aa16.65■□□□□ 0.26
PCDHA3-202ENST00000532566 RASA1P20936 1047 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 FGFR2P21802 821 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 HHATQ5VTY9 493 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 PPP1R21Q6ZMI0 780 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 ADPGKQ9BRR6 497 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 NR3C1P04150 777 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 POTEIP0CG38 1075 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 FCER1AP12319 257 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 CCND2P30279 289 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 LACTBP83111 547 aaPredicted RBP16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 KCNH2Q12809 1159 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 SUPT20HL1Q3ZLR7 823 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 FYB2Q5VWT5 728 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 POTEGQ6S5H5 508 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 POTEEQ6S8J3 1075 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 MAP3K14Q99558 947 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 TYW1Q9NV66 732 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 ZNF543Q08ER8 600 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 KCTD16Q68DU8 428 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms