RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ZNF286BP0CG31 522 aa25.15■■□□□ 1.62
LRRK1-208ENST00000532029 ZSCAN22P10073 491 aaPredicted RBP25.15■■□□□ 1.62
LRRK1-208ENST00000532029 FOXD4L5Q5VV16 416 aaPredicted RBP25.15■■□□□ 1.62
LRRK1-208ENST00000532029 MIS18BP1Q6P0N0 1132 aa25.15■■□□□ 1.62
LRRK1-208ENST00000532029 SMAP1Q8IYB5 467 aaPredicted RBP25.15■■□□□ 1.62
LRRK1-208ENST00000532029 FOXD4L4Q8WXT5 416 aaPredicted RBP25.15■■□□□ 1.62
LRRK1-208ENST00000532029 HAS1Q92839 578 aa25.15■■□□□ 1.62
LRRK1-208ENST00000532029 KATNAL1Q9BW62 490 aa25.15■■□□□ 1.62
LRRK1-208ENST00000532029 A0A0U1RQG5 324 aaPredicted RBP25.14■■□□□ 1.62
LRRK1-208ENST00000532029 CHMP2AO43633 222 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 LGALS2P05162 132 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 ATN1P54259 1190 aaPredicted RBP25.14■■□□□ 1.62
LRRK1-208ENST00000532029 CHMP4BP1P59074 171 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 TMEM60Q9H2L4 133 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 UNC45AQ9H3U1 944 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.14■■□□□ 1.62
LRRK1-208ENST00000532029 TSHZ2Q9NRE2 1034 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 ZNF215Q9UL58 517 aaPredicted RBP25.14■■□□□ 1.62
LRRK1-208ENST00000532029 SAMM50Q9Y512 469 aa25.14■■□□□ 1.62
LRRK1-208ENST00000532029 WDR64B1ANS9 1081 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 OR52Z1P0C646 297 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 SFNP31947 248 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 TXKP42681 527 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 JAK3P52333 1124 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 PSMC6P62333 389 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 GLG1Q92896 1179 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 MTMR9Q96QG7 549 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 HTATIP2Q9BUP3 242 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 AZI2Q9H6S1 392 aa25.13■■□□□ 1.61
LRRK1-208ENST00000532029 BACH1O14867 736 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 ATG7O95352 703 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 F2P00734 622 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 PSAPP07602 524 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 SUPT20HL2P0C7V6 817 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 PSEN2P49810 448 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 ABHD15Q6UXT9 468 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 SLC39A5Q6ZMH5 540 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 MIER3Q7Z3K6 550 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 RDM1Q8NG50 284 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 KAT2BQ92831 832 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 C16orf70Q9BSU1 422 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 SMARCAD1Q9H4L7 1026 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 PCDHA12Q9UN75 941 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 PCDHA10Q9Y5I2 948 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 EMSYQ7Z589 1322 aa25.12■■□□□ 1.61
LRRK1-208ENST00000532029 H3BRB1 525 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 F13A1P00488 732 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 PTGDRQ13258 359 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 PPP2R5CQ13362 524 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 ITGA7Q13683 1181 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 PKP1Q13835 747 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 MFSD10Q14728 455 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 FAM160B1Q5W0V3 765 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 TRIM50Q86XT4 487 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 SEZ6LQ9BYH1 1024 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 TUT1Q9H6E5 874 aaKnown RBP25.11■■□□□ 1.61
LRRK1-208ENST00000532029 TTC12Q9H892 705 aaPredicted RBP25.11■■□□□ 1.61
LRRK1-208ENST00000532029 DISC1Q9NRI5 854 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 VAV3Q9UKW4 847 aa25.11■■□□□ 1.61
LRRK1-208ENST00000532029 RBM19Q9Y4C8 960 aaKnown RBP25.11■■□□□ 1.61
LRRK1-208ENST00000532029 ARVCFO00192 962 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 LAD1O00515 517 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 LGR5O75473 907 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 BMP15O95972 392 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 KIAA0753Q2KHM9 967 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 FAM173BQ6P4H8 233 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 ZNF302Q9NR11 478 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 CEP131Q9UPN4 1083 aa25.1■■□□□ 1.61
LRRK1-208ENST00000532029 STAT5BP51692 787 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 TMEM266Q2M3C6 531 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 NBPF20Q3BBV1 942 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 FAM47CQ5HY64 1035 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 NCAPH2Q6IBW4 605 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 SWSAP1Q6NVH7 229 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 B3GNT9Q6UX72 402 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 C4orf32Q8N8J7 132 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 ERAP1Q9NZ08 941 aa25.09■■□□□ 1.61
LRRK1-208ENST00000532029 IGKV6D-21A0A0A0MT36 114 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 HAS3O00219 553 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 BRD1O95696 1058 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 LRRC26Q2I0M4 334 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 PLPPR4Q7Z2D5 763 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 CCDC60Q8IWA6 550 aaPredicted RBP25.08■■□□□ 1.61
LRRK1-208ENST00000532029 C7orf31Q8N865 590 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 ZNF396Q96N95 335 aaPredicted RBP25.08■■□□□ 1.61
LRRK1-208ENST00000532029 PCYT2Q99447 389 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 ATP11BQ9Y2G3 1177 aa25.08■■□□□ 1.61
LRRK1-208ENST00000532029 RTP1P59025 263 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 ATP2C1P98194 919 aaPredicted RBP25.07■■□□□ 1.6
LRRK1-208ENST00000532029 SNX17Q15036 470 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 SF3A1Q15459 793 aaKnown RBP25.07■■□□□ 1.6
LRRK1-208ENST00000532029 C1orf53Q5VUE5 145 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 PDXDC2PQ6P474 469 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 NFRKBQ6P4R8 1299 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 SLC43A3Q8NBI5 491 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 AFAP1L1Q8TED9 768 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 GABBR1Q9UBS5 961 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 GRIN2DO15399 1336 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 MROH7Q68CQ1 1323 aa25.07■■□□□ 1.6
LRRK1-208ENST00000532029 MARK3P27448 753 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms