RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 HLA-DQA1Q5Y7H0 255 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 ESRP1Q6NXG1 681 aaKnown RBP3.98□□□□□ -1.77
CD44-234ENST00000531873 ARHGAP36Q6ZRI8 547 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 C11orf74Q86VG3 221 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 PASD1Q8IV76 773 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 MYO1HQ8N1T3 1032 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 MAGEB6Q8N7X4 407 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 KIAA1958Q8N8K9 716 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 C1orf162Q8NEQ5 155 aaPredicted RBP3.98□□□□□ -1.77
CD44-234ENST00000531873 TTC8Q8TAM2 541 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 PIP4K2CQ8TBX8 421 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.98□□□□□ -1.77
CD44-234ENST00000531873 BCL7CQ8WUZ0 217 aaPredicted RBP3.98□□□□□ -1.77
CD44-234ENST00000531873 ASB11Q8WXH4 323 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 TRMT2BQ96GJ1 504 aaKnown RBP3.98□□□□□ -1.77
CD44-234ENST00000531873 FAM84AQ96KN4 292 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 ELF4Q99607 663 aaPredicted RBP3.98□□□□□ -1.77
CD44-234ENST00000531873 EPB41L1Q9H4G0 881 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 ZMAT4Q9H898 229 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 C14orf119Q9NWQ9 140 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 TNFRSF10DQ9UBN6 386 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 ZNF180Q9UJW8 692 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 SRPK3Q9UPE1 567 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 SPO11Q9Y5K1 396 aa3.98□□□□□ -1.77
CD44-234ENST00000531873 A0A1W2PQ45 241 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 A0A1W2PQY0 241 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 NOTOA8MTQ0 251 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 C22orf46C9J442 243 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 KIF3BO15066 747 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA12O60330 932 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 FUCA1P04066 466 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 ZGLP1P0C6A0 271 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 MSL3P1P0C860 447 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 ZSCAN20P17040 1043 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 ATF3P18847 181 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PTX3P26022 381 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 CORO7P57737 925 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 KRT85P78386 507 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 KIR3DS1Q14943 382 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 SEC23AQ15436 765 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 AOC3Q16853 763 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 HSF5Q4G112 596 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 FIGNQ5HY92 759 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 RALGPS1Q5JS13 557 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 TMEM240Q5SV17 173 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 CPZQ66K79 652 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 CCSAPQ6IQ19 270 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 RIOX2Q8IUF8 465 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 SIAH1Q8IUQ4 282 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 NLGN2Q8NFZ4 835 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 UHMK1Q8TAS1 419 aaKnown RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 JPH3Q8WXH2 748 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 FAM168AQ92567 244 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 CARS2Q9HA77 564 aaKnown RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 TCF7L1Q9HCS4 588 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 LUC7LQ9NQ29 371 aaKnown RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 TOPORSQ9NS56 1045 aaPredicted RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.97□□□□□ -1.77
CD44-234ENST00000531873 NOB1Q9ULX3 412 aaKnown RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 LUC7L2Q9Y383 392 aaKnown RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 TELO2Q9Y4R8 837 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA9Q9Y5G4 932 aaKnown RBP3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA8Q9Y5G5 932 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA7Q9Y5G6 932 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA6Q9Y5G7 932 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA3Q9Y5H0 932 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 PCDHGA2Q9Y5H1 932 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 B3GALT1Q9Y5Z6 326 aa3.97□□□□□ -1.77
CD44-234ENST00000531873 WASHC2AQ641Q2 1341 aa3.96□□□□□ -1.77
CD44-234ENST00000531873 TRIM75PA6NK02 468 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 H2AFYO75367 372 aaKnown RBP3.96□□□□□ -1.78
CD44-234ENST00000531873 DGKIO75912 1065 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 RBP3P10745 1247 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 KIR2DL1P43626 348 aaPredicted RBP3.96□□□□□ -1.78
CD44-234ENST00000531873 KIR2DL2P43627 348 aaPredicted RBP3.96□□□□□ -1.78
CD44-234ENST00000531873 KIF11P52732 1056 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 SPIRE1Q08AE8 756 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 FAPQ12884 760 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 LRRC32Q14392 662 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 ODF1Q14990 250 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 MLC1Q15049 377 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 PLCL1Q15111 1095 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 PDCD1Q15116 288 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 MAP9Q49MG5 647 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 EMC4Q5J8M3 183 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 GPR158Q5T848 1215 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 MROH9Q5TGP6 573 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 RASSF3Q86WH2 238 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 C1QL4Q86Z23 238 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 TPH2Q8IWU9 490 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 STK11IPQ8N1F8 1099 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 ZNF610Q8N9Z0 462 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 LMBR1Q8WVP7 490 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 DLG3Q92796 817 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 CCDC136Q96JN2 1154 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 TOX2Q96NM4 488 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 PLCD4Q9BRC7 762 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 CD244Q9BZW8 370 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 ADAMTS10Q9H324 1103 aa3.96□□□□□ -1.78
CD44-234ENST00000531873 SLC6A20Q9NP91 592 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms