RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	FAM86B1	E9PN63	330 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	IKBKB	O14920	756 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	RGS20	O76081	388 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	FAM86B2	P0C5J1	330 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	TXN	P10599	105 aa	Known RBP	10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	RARB	P10826	455 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	SMPD1	P17405	629 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	ATP2B1	P20020	1258 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	TXLNA	P40222	546 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	PRPH	P41219	470 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	USP11	P51784	963 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	PTGDR	Q13258	359 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	MTMR1	Q13613	665 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	PRR16	Q569H4	304 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	TMEM63B	Q5T3F8	832 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	IQSEC1	Q6DN90	963 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	LUZP1	Q86V48	1076 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	PLA2G4D	Q86XP0	818 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	CYP2W1	Q8TAV3	490 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	GPRASP2	Q96D09	838 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	ABHD8	Q96I13	439 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	DEFB118	Q96PH6	123 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	MXRA8	Q9BRK3	442 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	TRIM5	Q9C035	493 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	JADE2	Q9NQC1	790 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	ZKSCAN5	Q9Y2L8	839 aa		10.62	□□□□□ -0.71
NXF1-209	ENST00000531474	SPATA31C2	B4DYI2	1134 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	MEIS1	O00470	390 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	POLR2D	O15514	142 aa	Known RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	ADCY6	O43306	1168 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	EDIL3	O43854	480 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	ZNF500	O60304	480 aa	Predicted RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	SORBS3	O60504	671 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	CCNT1	O60563	726 aa	Known RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	MSC	O60682	206 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	ARIH2	O95376	493 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	TDP2	O95551	362 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	SLFN14	P0C7P3	912 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	PTGS1	P23219	599 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	CIITA	P33076	1130 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	MDM2	Q00987	491 aa	Predicted RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	ZNF174	Q15697	407 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	LY6K	Q17RY6	165 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	LONRF3	Q496Y0	759 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	DUSP28	Q4G0W2	176 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	GJC2	Q5T442	439 aa	Predicted RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	NT5DC1	Q5TFE4	455 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	CCDC62	Q6P9F0	684 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	KCNV1	Q6PIU1	500 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	NIPA1	Q7RTP0	329 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	IQUB	Q8NA54	791 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	MLKL	Q8NB16	471 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	MRFAP1L1	Q96HT8	127 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	CDHR1	Q96JP9	859 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	UIMC1	Q96RL1	719 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	NAP1L4	Q99733	375 aa	Known RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	TMEM106C	Q9BVX2	250 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	GTPBP4	Q9BZE4	634 aa	Known RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	CSRNP2	Q9H175	543 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	XPNPEP3	Q9NQH7	507 aa		10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	PAK6	Q9NQU5	681 aa	Predicted RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	DDX41	Q9UJV9	622 aa	Known RBP	10.61	□□□□□ -0.71
NXF1-209	ENST00000531474	IGLV3-22	A0A075B6J6	115 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	NKRF	O15226	690 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	NEMF	O60524	1076 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	DUSP11	O75319	330 aa	Known RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	GGPS1	O95749	300 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	PGK1	P00558	417 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	MYL1	P05976	194 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	GJB1	P08034	283 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	AR	P10275	920 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	GCFC2	P16383	781 aa	Known RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	UBA1	P22314	1058 aa	Known RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	CYP3A7	P24462	503 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	ICAM3	P32942	547 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	SET	Q01105	290 aa	Predicted RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	POSTN	Q15063	836 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	DTHD1	Q6ZMT9	781 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	TLK2	Q86UE8	772 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	DRC7	Q8IY82	874 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	OR6J1	Q8NGC5	347 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	U2AF1L4	Q8WU68	220 aa	Known RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	COPS5	Q92905	334 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	SMARCE1	Q969G3	411 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	AK8	Q96MA6	479 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	AP5M1	Q9H0R1	490 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	SPC25	Q9HBM1	224 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	AGO4	Q9HCK5	861 aa	Known RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	KCNH7	Q9NS40	1196 aa		10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	DDX25	Q9UHL0	483 aa	Known RBP	10.6	□□□□□ -0.71
NXF1-209	ENST00000531474	SYNRG	Q9UMZ2	1314 aa		10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	WNT7A	O00755	349 aa		10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	MAFG	O15525	162 aa		10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	DYNC1LI2	O43237	492 aa	Predicted RBP	10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	SLC37A4	O43826	429 aa		10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	ATP9A	O75110	1047 aa		10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	GH1	P01241	217 aa		10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	TFRC	P02786	760 aa	Known RBP	10.59	□□□□□ -0.71
NXF1-209	ENST00000531474	C6orf222	P0C671	652 aa	Predicted RBP	10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms