RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SLC39A5Q6ZMH5 540 aa17.3■□□□□ 0.36
CCS-206ENST00000530961 ETNPPLQ8TBG4 499 aa17.3■□□□□ 0.36
CCS-206ENST00000530961 KATNAL1Q9BW62 490 aa17.3■□□□□ 0.36
CCS-206ENST00000530961 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
CCS-206ENST00000530961 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
CCS-206ENST00000530961 TNFRSF10AO00220 468 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 STX6O43752 255 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 SLC37A4O43826 429 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 MARCH6O60337 910 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 GAS7O60861 476 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 BAG4O95429 457 aaKnown RBP17.29■□□□□ 0.36
CCS-206ENST00000530961 KRT76Q01546 638 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 LRCH2Q5VUJ6 765 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 ZNF746Q6NUN9 644 aaPredicted RBP17.29■□□□□ 0.36
CCS-206ENST00000530961 BRAPQ7Z569 592 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 SLFN12Q8IYM2 578 aa17.29■□□□□ 0.36
CCS-206ENST00000530961 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
CCS-206ENST00000530961 NEMFO60524 1076 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 PSMD10O75832 226 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 ATG7O95352 703 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 TCF7P36402 384 aaPredicted RBP17.28■□□□□ 0.36
CCS-206ENST00000530961 ACTR2P61160 394 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 SP4Q02446 784 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 SNX17Q15036 470 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 FAM109BQ6ICB4 259 aaPredicted RBP17.28■□□□□ 0.36
CCS-206ENST00000530961 SMAP1Q8IYB5 467 aaPredicted RBP17.28■□□□□ 0.36
CCS-206ENST00000530961 GUCD1Q96NT3 240 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 C16orf70Q9BSU1 422 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
CCS-206ENST00000530961 LCTP09848 1927 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 ZNFX1Q9P2E3 1918 aaKnown RBP17.27■□□□□ 0.36
CCS-206ENST00000530961 GSTTP1A0A1W2PQM5 241 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 DDX39AO00148 427 aaKnown RBP17.27■□□□□ 0.36
CCS-206ENST00000530961 ARVCFO00192 962 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 CCNE2O96020 404 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 F2P00734 622 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 LGALS2P05162 132 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 MCM7P33993 719 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.36
CCS-206ENST00000530961 ITGA7Q13683 1181 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 SLC43A3Q8NBI5 491 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 RDM1Q8NG50 284 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 KAT2BQ92831 832 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 SMARCAD1Q9H4L7 1026 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.36
CCS-206ENST00000530961 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
CCS-206ENST00000530961 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 WDR64B1ANS9 1081 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 H3BRB1 525 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 SFNP31947 248 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 CDK7P50613 346 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
CCS-206ENST00000530961 ZNF174Q15697 407 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 CALCRLQ16602 461 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 LRRC26Q2I0M4 334 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 NFRKBQ6P4R8 1299 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 ABHD15Q6UXT9 468 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 SPRYD3Q8NCJ5 442 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 HAS1Q92839 578 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 TOX2Q96NM4 488 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 MTMR9Q96QG7 549 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 ZSCAN16Q9H4T2 348 aaPredicted RBP17.26■□□□□ 0.35
CCS-206ENST00000530961 TUT1Q9H6E5 874 aaKnown RBP17.26■□□□□ 0.35
CCS-206ENST00000530961 AZI2Q9H6S1 392 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 PCDHA10Q9Y5I2 948 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 PLXNA1Q9UIW2 1896 aa17.26■□□□□ 0.35
CCS-206ENST00000530961 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 HAS3O00219 553 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 WNT7AO00755 349 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 LGR5O75473 907 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 PSAPP07602 524 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 ZNF286BP0CG31 522 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 SLC26A2P50443 739 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 JAK3P52333 1124 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 PSMC6P62333 389 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 PTPN11Q06124 597 aaPredicted RBP17.25■□□□□ 0.35
CCS-206ENST00000530961 MFSD10Q14728 455 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 NBPF20Q3BBV1 942 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 UTP14CQ5TAP6 766 aaKnown RBP17.25■□□□□ 0.35
CCS-206ENST00000530961 B3GNT9Q6UX72 402 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 PLPPR4Q7Z2D5 763 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 ANKRD33Q7Z3H0 272 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 GLG1Q92896 1179 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
CCS-206ENST00000530961 DISC1Q9NRI5 854 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 ERAP1Q9NZ08 941 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 TELO2Q9Y4R8 837 aa17.25■□□□□ 0.35
CCS-206ENST00000530961 LRRC37A2A6NM11 1700 aa17.24■□□□□ 0.35
CCS-206ENST00000530961 GRIN2DO15399 1336 aa17.24■□□□□ 0.35
CCS-206ENST00000530961 EMSYQ7Z589 1322 aa17.24■□□□□ 0.35
CCS-206ENST00000530961 LAD1O00515 517 aa17.24■□□□□ 0.35
CCS-206ENST00000530961 SUPT20HL2P0C7V6 817 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms