RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 LTFP02788 710 aa8.28□□□□□ -1.08
CASP4-208ENST00000530309 HSP90B1P14625 803 aaKnown RBP8.28□□□□□ -1.08
CASP4-208ENST00000530309 GJA4P35212 333 aa8.28□□□□□ -1.08
CASP4-208ENST00000530309 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
CASP4-208ENST00000530309 CPZQ66K79 652 aa8.28□□□□□ -1.08
CASP4-208ENST00000530309 FSTL4Q6MZW2 842 aa8.28□□□□□ -1.08
CASP4-208ENST00000530309 ARRDC4Q8NCT1 418 aa8.28□□□□□ -1.08
CASP4-208ENST00000530309 LIN37Q96GY3 246 aaPredicted RBP8.28□□□□□ -1.08
CASP4-208ENST00000530309 B3GALT1Q9Y5Z6 326 aa8.28□□□□□ -1.08
CASP4-208ENST00000530309 GPR39O43194 453 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 PTPN1P18031 435 aaKnown RBP8.27□□□□□ -1.09
CASP4-208ENST00000530309 ID4P47928 161 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 RNF219Q5W0B1 726 aaPredicted RBP8.27□□□□□ -1.09
CASP4-208ENST00000530309 BTBD8Q5XKL5 378 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 C11orf74Q86VG3 221 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 EFHBQ8N7U6 833 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 TTLL11Q8NHH1 800 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 DLG3Q92796 817 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 KCNH7Q9NS40 1196 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 SPTLC3Q9NUV7 552 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 H2AFY2Q9P0M6 372 aaPredicted RBP8.27□□□□□ -1.09
CASP4-208ENST00000530309 APOBEC2Q9Y235 224 aaKnown RBP8.27□□□□□ -1.09
CASP4-208ENST00000530309 CARMIL2Q6F5E8 1435 aa8.27□□□□□ -1.09
CASP4-208ENST00000530309 FAM90A27PA6NNH2 459 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 DVL2O14641 736 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
CASP4-208ENST00000530309 PMLP29590 882 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 VIPR1P32241 457 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 EVA1CP58658 441 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 SEC23AQ15436 765 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 ZNF174Q15697 407 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 LHFPL2Q6ZUX7 228 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 TMC6Q7Z403 805 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 ZNF605Q86T29 641 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 KIAA1958Q8N8K9 716 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 BCAS3Q9H6U6 928 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 EMC7Q9NPA0 242 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 RIC8BQ9NVN3 520 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 SPO11Q9Y5K1 396 aa8.26□□□□□ -1.09
CASP4-208ENST00000530309 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 ALG1L2C9J202 215 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 BUB1BO60566 1050 aaPredicted RBP8.25□□□□□ -1.09
CASP4-208ENST00000530309 GRIN1Q05586 938 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 ATP13A4Q4VNC1 1196 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 XP32Q5T750 250 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 SPATS2Q86XZ4 545 aaKnown RBP8.25□□□□□ -1.09
CASP4-208ENST00000530309 MIB1Q86YT6 1006 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 ALG3Q92685 438 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 PCIF1Q9H4Z3 704 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 HOMER2Q9NSB8 354 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 TYW1Q9NV66 732 aaKnown RBP8.25□□□□□ -1.09
CASP4-208ENST00000530309 FAM53CQ9NYF3 392 aa8.25□□□□□ -1.09
CASP4-208ENST00000530309 C4BPAP04003 597 aaKnown RBP8.24□□□□□ -1.09
CASP4-208ENST00000530309 SLC9A1P19634 815 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 KIF11P52732 1056 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 SRSF3P84103 164 aaKnown RBP8.24□□□□□ -1.09
CASP4-208ENST00000530309 TMPRSS15P98073 1019 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 CC2D1AQ6P1N0 951 aaPredicted RBP8.24□□□□□ -1.09
CASP4-208ENST00000530309 NECAB2Q7Z6G3 386 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 AMIGO3Q86WK7 504 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 PASD1Q8IV76 773 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 FAM126BQ8IXS8 530 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 ELF4Q99607 663 aaPredicted RBP8.24□□□□□ -1.09
CASP4-208ENST00000530309 YIPF4Q9BSR8 244 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 ACSS2Q9NR19 701 aa8.24□□□□□ -1.09
CASP4-208ENST00000530309 DDX56Q9NY93 547 aaKnown RBP8.24□□□□□ -1.09
CASP4-208ENST00000530309 ACOT7O00154 380 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 PEX10O60683 326 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 FAHP16930 419 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 ZNF200P98182 395 aaPredicted RBP8.23□□□□□ -1.09
CASP4-208ENST00000530309 TMEM132BQ14DG7 1078 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 PAN2Q504Q3 1202 aaKnown RBP8.23□□□□□ -1.09
CASP4-208ENST00000530309 ETV3LQ6ZN32 361 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 TOE1Q96GM8 510 aaKnown RBP8.23□□□□□ -1.09
CASP4-208ENST00000530309 DIRC2Q96SL1 478 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 EPB41L4BQ9H329 900 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 NSUN3Q9H649 340 aaKnown RBP8.23□□□□□ -1.09
CASP4-208ENST00000530309 DCP1AQ9NPI6 582 aaPredicted RBP8.23□□□□□ -1.09
CASP4-208ENST00000530309 SLC5A4Q9NY91 659 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.23□□□□□ -1.09
CASP4-208ENST00000530309 DTLQ9NZJ0 730 aa8.23□□□□□ -1.09
CASP4-208ENST00000530309 PRAMEF25A6NGN4 478 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 TGM5O43548 720 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 CYP17A1P05093 508 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 ASGR2P07307 311 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 SDHAP31040 664 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 GUCY2FP51841 1108 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 FAM50AQ14320 339 aaKnown RBP8.22□□□□□ -1.09
CASP4-208ENST00000530309 PRR23BQ6ZRT6 265 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 FERMT3Q86UX7 667 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 STAG1Q8WVM7 1258 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 HSPBP1Q9NZL4 362 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 PLA2G2DQ9UNK4 145 aa8.22□□□□□ -1.09
CASP4-208ENST00000530309 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.22□□□□□ -1.09
CASP4-208ENST00000530309 ULK1O75385 1050 aa8.21□□□□□ -1.1
CASP4-208ENST00000530309 LRG1P02750 347 aa8.21□□□□□ -1.1
CASP4-208ENST00000530309 TAL1P17542 331 aaPredicted RBP8.21□□□□□ -1.1
CASP4-208ENST00000530309 FBLN1P23142 703 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms