RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 CNR2P34972 360 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 MLLT6P55198 1093 aaPredicted RBP7.04□□□□□ -1.28
USP47-209ENST00000530041 GPR19Q15760 415 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 SKOR2Q2VWA4 1001 aaPredicted RBP7.04□□□□□ -1.28
USP47-209ENST00000530041 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 DTX3Q8N9I9 347 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 THAP3Q8WTV1 239 aaPredicted RBP7.04□□□□□ -1.28
USP47-209ENST00000530041 DNAJC2Q99543 621 aaKnown RBP7.04□□□□□ -1.28
USP47-209ENST00000530041 L2HGDHQ9H9P8 463 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 CATSPERZQ9NTU4 200 aa7.04□□□□□ -1.28
USP47-209ENST00000530041 CCDC163A0A0D9SF12 145 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 GSTA4O15217 222 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 EFCAB14O75071 495 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 CRTAMO95727 393 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 ENO2P09104 434 aaPredicted RBP7.03□□□□□ -1.28
USP47-209ENST00000530041 BUD31P41223 144 aaPredicted RBP7.03□□□□□ -1.28
USP47-209ENST00000530041 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 C16orf59Q7L2K0 433 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 NLGN4XQ8N0W4 816 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 ZSWIM2Q8NEG5 633 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 LCORQ96JN0 433 aaPredicted RBP7.03□□□□□ -1.28
USP47-209ENST00000530041 YTHDC1Q96MU7 727 aaKnown RBP7.03□□□□□ -1.28
USP47-209ENST00000530041 BDH2Q9BUT1 245 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 CD244Q9BZW8 370 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 OSBPL2Q9H1P3 480 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 PCDHA9Q9Y5H5 950 aa7.03□□□□□ -1.28
USP47-209ENST00000530041 ACOT7O00154 380 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 CYP1A1P04798 512 aaPredicted RBP7.02□□□□□ -1.29
USP47-209ENST00000530041 PYGMP11217 842 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 ST5P78524 1137 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 PLP2Q04941 152 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 C2orf27AQ580R0 203 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 TRIM61Q5EBN2 209 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 CD276Q5ZPR3 534 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 ARHGAP36Q6ZRI8 547 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 LGI4Q8N135 537 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 GSTCDQ8NEC7 633 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 ZCCHC14Q8WYQ9 949 aaKnown RBP7.02□□□□□ -1.29
USP47-209ENST00000530041 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 TMEM168Q9H0V1 697 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 SLC52A2Q9HAB3 445 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 NDOR1Q9UHB4 597 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 CBLCQ9ULV8 474 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 SRPK3Q9UPE1 567 aa7.02□□□□□ -1.29
USP47-209ENST00000530041 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.01□□□□□ -1.29
USP47-209ENST00000530041 AMY2AP04746 511 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 CKMP06732 381 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 SRGAP2CP0DJJ0 459 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 PDE6AP16499 860 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 AMY2BP19961 511 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 CRY1Q16526 586 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 FAM47CQ5HY64 1035 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 TRMT10BQ6PF06 316 aaKnown RBP7.01□□□□□ -1.29
USP47-209ENST00000530041 ZC3H7AQ8IWR0 971 aaKnown RBP7.01□□□□□ -1.29
USP47-209ENST00000530041 FTSJ1Q9UET6 329 aa7.01□□□□□ -1.29
USP47-209ENST00000530041 CNOT11Q9UKZ1 510 aaKnown RBP7.01□□□□□ -1.29
USP47-209ENST00000530041 CCDC66A2RUB6 948 aa7□□□□□ -1.29
USP47-209ENST00000530041 ZNF839A8K0R7 811 aa7□□□□□ -1.29
USP47-209ENST00000530041 MAN2B1O00754 1011 aa7□□□□□ -1.29
USP47-209ENST00000530041 CHGBP05060 677 aa7□□□□□ -1.29
USP47-209ENST00000530041 APPP05067 770 aa7□□□□□ -1.29
USP47-209ENST00000530041 COL6A1P12109 1028 aa7□□□□□ -1.29
USP47-209ENST00000530041 PTPN1P18031 435 aaKnown RBP7□□□□□ -1.29
USP47-209ENST00000530041 PFKPQ01813 784 aa7□□□□□ -1.29
USP47-209ENST00000530041 NFE2L2Q16236 605 aa7□□□□□ -1.29
USP47-209ENST00000530041 SKIDA1Q1XH10 827 aa7□□□□□ -1.29
USP47-209ENST00000530041 FIGNQ5HY92 759 aa7□□□□□ -1.29
USP47-209ENST00000530041 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
USP47-209ENST00000530041 OSTM1Q86WC4 334 aa7□□□□□ -1.29
USP47-209ENST00000530041 LILRB2Q8N423 598 aa7□□□□□ -1.29
USP47-209ENST00000530041 MBD6Q96DN6 1003 aa7□□□□□ -1.29
USP47-209ENST00000530041 CDK11AQ9UQ88 783 aaPredicted RBP7□□□□□ -1.29
USP47-209ENST00000530041 INVSQ9Y283 1065 aa7□□□□□ -1.29
USP47-209ENST00000530041 FAM90A27PA6NNH2 459 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 KCNQ2O43526 872 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 GJA4P35212 333 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 SMAD2Q15796 467 aaKnown RBP6.99□□□□□ -1.29
USP47-209ENST00000530041 PHF19Q5T6S3 580 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
USP47-209ENST00000530041 SLC7A14Q8TBB6 771 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 IGDCC4Q8TDY8 1250 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 MAGEB10Q96LZ2 347 aaPredicted RBP6.99□□□□□ -1.29
USP47-209ENST00000530041 MRPL4Q9BYD3 311 aaKnown RBP6.99□□□□□ -1.29
USP47-209ENST00000530041 ARHGAP20Q9P2F6 1191 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 ZFP69BQ9UJL9 534 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 PTCH2Q9Y6C5 1203 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 ATP23Q9Y6H3 246 aa6.99□□□□□ -1.29
USP47-209ENST00000530041 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 B4GALT3O60512 393 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 FBXO21O94952 628 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 PLATP00750 562 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 KRT15P19012 456 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 DNM2P50570 870 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 JAM2P57087 298 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 LACTBP83111 547 aaPredicted RBP6.98□□□□□ -1.29
USP47-209ENST00000530041 DBPQ10586 325 aaPredicted RBP6.98□□□□□ -1.29
USP47-209ENST00000530041 TBC1D10BQ4KMP7 808 aaPredicted RBP6.98□□□□□ -1.29
USP47-209ENST00000530041 PKN3Q6P5Z2 889 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 EP400NLQ6ZTU2 488 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms