RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 ORC6Q9Y5N6 252 aa8.24□□□□□ -1.09
CTNND1-223ENST00000529986 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 MED23Q9ULK4 1368 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 MEIS1O00470 390 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 DCTN3O75935 186 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SERPING1P05155 500 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 CYP2C19P33261 490 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 CUL1Q13616 776 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 PCGF5Q86SE9 256 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 NCAPGQ9BPX3 1015 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 FOXP1Q9H334 677 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SH2D4AQ9H788 454 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 DISC1Q9NRI5 854 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 STOML1Q9UBI4 398 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 GSTA4O15217 222 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SUPT3HO75486 399 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 FMNL1O95466 1100 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 KRT14P02533 472 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 ADORA1P30542 326 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 GYG1P46976 350 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 PPP2R2AP63151 447 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 DYNC1I2Q13409 638 aaKnown RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 TSTA3Q13630 321 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 RMDN2Q96LZ7 410 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 FAM161BQ96MY7 647 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 RASA4BC9J798 803 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 RASA4O43374 803 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 TRIM37O94972 964 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 MFAP3P55082 362 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 DDB1Q16531 1140 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SPOPLQ6IQ16 392 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SARM1Q6SZW1 724 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 FAM186BQ8IYM0 893 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 METTL13Q8N6R0 699 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SKA2Q8WVK7 121 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 ZNF496Q96IT1 587 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 PDLIM2Q96JY6 352 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 NUDCD1Q96RS6 583 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 STAP2Q9UGK3 403 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 DBNLQ9UJU6 430 aaKnown RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 GDAQ9Y2T3 454 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 CCDC195A0A1B0GUA6 201 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 TRIM49BA6NDI0 452 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 RASSF10A6NK89 507 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 LMNAP02545 664 aaKnown RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 VSNL1P62760 191 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 UBXN2AP68543 259 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 TMPRSS15P98073 1019 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SH2D3CQ8N5H7 860 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 RAPGEF5Q92565 580 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 WDR24Q96S15 920 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-223ENST00000529986 CCDC68Q9H2F9 335 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 SAYSD1Q9NPB0 183 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 PARP3Q9Y6F1 533 aa8.23□□□□□ -1.09
CTNND1-223ENST00000529986 DIAPH2O60879 1101 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 BAG6P46379 1132 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 YWHAEP62258 255 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PSMD2Q13200 908 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 SPARCL1Q14515 664 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 DARS2Q6PI48 645 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PRPF38AQ8NAV1 312 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NRBF2Q96F24 287 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 CALN1Q9BXU9 219 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 IRX2Q9BZI1 471 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 KCNF1Q9H3M0 494 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NDST4Q9H3R1 872 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 ABHD10Q9NUJ1 306 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 ABL1P00519 1130 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 DAB2P98082 770 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NLRX1Q86UT6 975 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 CCNYQ8ND76 341 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PYROXD1Q8WU10 500 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 RIN2Q8WYP3 895 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NT5C1BQ96P26 610 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 TRIM55Q9BYV6 548 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PALMDQ9NP74 551 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 NLRP1Q9C000 1473 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 A6NJR5 290 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 GOLGA8MH3BSY2 632 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 P4HA1P13674 534 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 CNGA1P29973 690 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PSMC2P35998 433 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PMS1P54277 932 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PSMC1P62191 440 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 GFPT1Q06210 699 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 DNAAF3Q8N9W5 541 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 PUS3Q9BZE2 481 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 CACYBPQ9HB71 228 aaKnown RBP8.22□□□□□ -1.09
CTNND1-223ENST00000529986 SPC25Q9HBM1 224 aa8.22□□□□□ -1.09
CTNND1-223ENST00000529986 ZNF521Q96K83 1311 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms