RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TBX2Q13207 712 aaPredicted RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 SYCP1Q15431 976 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 TATDN1Q6P1N9 297 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 SV2BQ7L1I2 683 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 ARRDC4Q8NCT1 418 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 GMCL1P1Q8NEA9 526 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 ATXN2LQ8WWM7 1075 aaKnown RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 BAG1Q99933 345 aaPredicted RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 C7orf25Q9BPX7 421 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 SAMSN1Q9NSI8 373 aaKnown RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 KBTBD4Q9NVX7 518 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 LRWD1Q9UFC0 647 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 LIMA1Q9UHB6 759 aaKnown RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 ITIH6Q6UXX5 1313 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 NCOR1O75376 2440 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 FGFR1OPO95684 399 aaKnown RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 ASNSP08243 561 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 ERVK-24P63145 666 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 ICA1Q05084 483 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 MAP2K5Q13163 448 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 CNGA4Q8IV77 575 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 ZNF592Q92610 1267 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 STAMQ92783 540 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 THAP9Q9H5L6 903 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
USF1-208ENST00000528768 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 LTBP2Q14767 1821 aa13.11□□□□□ -0.31
USF1-208ENST00000528768 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
USF1-208ENST00000528768 N4BP3O15049 544 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 RAD21O60216 631 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
USF1-208ENST00000528768 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
USF1-208ENST00000528768 PLCG1P19174 1290 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 TECP42680 631 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 TXKP42681 527 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 USP11P51784 963 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
USF1-208ENST00000528768 SEPT2Q15019 361 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 KMT5BQ4FZB7 885 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 IGSF22Q8N9C0 903 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 MTMR9Q96QG7 549 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 NT5C3AQ9H0P0 336 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
USF1-208ENST00000528768 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
USF1-208ENST00000528768 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
USF1-208ENST00000528768 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 KCNJ18B7U540 433 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 KBTBD13C9JR72 458 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 CASP1P29466 404 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
USF1-208ENST00000528768 ASIC1P78348 528 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 PDE4DQ08499 809 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
USF1-208ENST00000528768 PSMD2Q13200 908 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 MTMR2Q13614 643 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 KCNJ12Q14500 433 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
USF1-208ENST00000528768 CCL14Q16627 93 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
USF1-208ENST00000528768 COBLL1Q53SF7 1204 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 GIMAP8Q8ND71 665 aaPredicted RBP13.09□□□□□ -0.31
USF1-208ENST00000528768 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
USF1-208ENST00000528768 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms