RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 KLRC1P26715 233 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 HOXA7P31268 230 aaPredicted RBP20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 CASP5P51878 434 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 ARSHQ5FYA8 562 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 SP8Q8IXZ3 490 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 RNF10Q8N5U6 811 aaKnown RBP20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 PACSIN1Q9BY11 444 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 KCNMB3Q9NPA1 279 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 STIM2Q9P246 746 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 PACSIN2Q9UNF0 486 aaPredicted RBP20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 LTBP1Q14766 1721 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 POLRMTO00411 1230 aaKnown RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 MEIS1O00470 390 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 TRIM66O15016 1216 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 C8orf74Q6P047 294 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 DNAJC18Q9H819 358 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 A0A087X0T9 212 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 GNA14O95837 355 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 FAM228BP0C875 321 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 EPS15P42566 896 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 PSMC6P62333 389 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 TCP10Q12799 353 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 CDC37Q16543 378 aaPredicted RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 APOBEC3HQ6NTF7 200 aaKnown RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 SRLQ86TD4 932 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 SYN2Q92777 582 aaPredicted RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 P2RX7Q99572 595 aaKnown RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 NUCKS1Q9H1E3 243 aaKnown RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 ADAMTS1Q9UHI8 967 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 FEZ2Q9UHY8 353 aaPredicted RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 RRP15Q9Y3B9 282 aaKnown RBP20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 PCDHAC2Q9Y5I4 1007 aa20.76■□□□□ 0.91
TM9SF1-206ENST00000528669 MYO1CO00159 1063 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 ACTN1P12814 892 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 EEF2P13639 858 aaKnown RBP20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 SLC12A3P55017 1021 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 SKIDA1Q1XH10 827 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 TSEN2Q8NCE0 465 aaKnown RBP20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 SUGT1Q9Y2Z0 365 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 MYO3BQ8WXR4 1341 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 RNASE9P60153 205 aaKnown RBP20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 KLHL30Q0D2K2 578 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 KCNH2Q12809 1159 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 PRR16Q569H4 304 aa20.75■□□□□ 0.91
TM9SF1-206ENST00000528669 GOLGA6CA6NDK9 693 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 GOLGA6DP0CG33 693 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 TAL1P17542 331 aaPredicted RBP20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 NR2F2P24468 414 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 MARSP56192 900 aaKnown RBP20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 NAB2Q15742 525 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 SLC18A3Q16572 532 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 CFAP221Q4G0U5 840 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 CATSPER3Q86XQ3 398 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 C10orf67Q8IYJ2 551 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 DHX36Q9H2U1 1008 aaKnown RBP20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 POLD4Q9HCU8 107 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 GOLGA6AQ9NYA3 693 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 RSPH14Q9UHP6 348 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 PABPC4Q13310 644 aaKnown RBP eCLIP20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 KIAA0753Q2KHM9 967 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 SLFN13Q68D06 897 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 ARHGAP27Q6ZUM4 889 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 FAM76AQ8TAV0 307 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 TEKT1Q969V4 418 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 NAP1L4Q99733 375 aaKnown RBP20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 GANQ9H2C0 597 aa20.74■□□□□ 0.91
TM9SF1-206ENST00000528669 GREB1LQ9C091 1923 aaPredicted RBP20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 MEIS2O14770 477 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 CETN3O15182 167 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 USP11P51784 963 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 EPHB4P54760 987 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 ASIC2Q16515 512 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 DNAAF5Q86Y56 855 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 ZSCAN5CA6NGD5 496 aaPredicted RBP20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 KCNQ5Q9NR82 932 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 TSKSQ9UJT2 592 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 HDAC9Q9UKV0 1011 aa20.73■□□□□ 0.91
TM9SF1-206ENST00000528669 LRRC37AA6NMS7 1700 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 ESYT3A0FGR9 886 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 FRMD3A2A2Y4 597 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 G3V3G9 751 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 GLI1P08151 1106 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 SLC9A1P19634 815 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 ARHGAP4P98171 946 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 USH1GQ495M9 461 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 DCAF8Q5TAQ9 597 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 RUBCNQ92622 972 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 BCAS3Q9H6U6 928 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 LUC7LQ9NQ29 371 aaKnown RBP20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 SPIRE1Q08AE8 756 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 GIT2Q14161 759 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 SFR1Q86XK3 245 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 SLFN12Q8IYM2 578 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 GJD4Q96KN9 370 aaPredicted RBP20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 AIPL1Q9NZN9 384 aa20.72■□□□□ 0.91
TM9SF1-206ENST00000528669 CYP3A7-CYP3A51PA0A087WV96 503 aa20.71■□□□□ 0.91
TM9SF1-206ENST00000528669 KLRG2A4D1S0 409 aaPredicted RBP20.71■□□□□ 0.91
TM9SF1-206ENST00000528669 DDTLA6NHG4 134 aaPredicted RBP20.71■□□□□ 0.91
TM9SF1-206ENST00000528669 CYP3A7P24462 503 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms